Difference between revisions of "URAt2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URAt2 URAt2] == * direction: ** LEFT-TO-RIGHT * common name: ** Uracil transport in via proton symp...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00362 map00362] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/URAt2 URAt2] ==
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* common_name:
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* direction:
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** Benzoate degradation
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** LEFT-TO-RIGHT
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* common name:
 +
** Uracil transport in via proton symport
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''114''' reactions in the full pathway
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* With identifiers:
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* [[ACACT1r]]
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** 1.0 [[ura]][e] '''+''' 1.0 [[h]][e] '''=>''' 1.0 [[ura]][c] '''+''' 1.0 [[h]][c]
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* [[ACALD]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1.0 Uracil[e] '''+''' 1.0 H+[e] '''=>''' 1.0 Uracil[c] '''+''' 1.0 H+[c]
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* [http://bigg.ucsd.edu/universal/reactions/3HOPCD 3HOPCD]
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* [http://bigg.ucsd.edu/universal/reactions/3MCAT23DOX 3MCAT23DOX]
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== Genes associated with this reaction  ==
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* [http://bigg.ucsd.edu/universal/reactions/3OADPCOAT 3OADPCOAT]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://bigg.ucsd.edu/universal/reactions/3OXCOAT 3OXCOAT]
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* Gene: [[EF1720]]
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* [http://bigg.ucsd.edu/universal/reactions/4CMLCL_kt 4CMLCL_kt]
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** Source: [[orthology-l_plantarum_wcfs1]]
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* [http://bigg.ucsd.edu/universal/reactions/4HBHYOX 4HBHYOX]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [http://bigg.ucsd.edu/universal/reactions/4HBZFm 4HBZFm]
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* Gene: [[EF3000]]
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* [http://bigg.ucsd.edu/universal/reactions/4MCAT23DOX 4MCAT23DOX]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [http://bigg.ucsd.edu/universal/reactions/4OD2 4OD2]
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== Pathways  ==
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* [http://bigg.ucsd.edu/universal/reactions/4OT2 4OT2]
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== Reconstruction information  ==
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* [http://bigg.ucsd.edu/universal/reactions/ACACT10m ACACT10m]
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* Category: [[orthology]]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
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*** Tool: [[pantograph]]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT2 ACACT2]
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** Source: [[orthology-l_plantarum_wcfs1]]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT2m ACACT2m]
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*** Tool: [[pantograph]]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT2r ACACT2r]
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−
* [http://bigg.ucsd.edu/universal/reactions/ACACT3 ACACT3]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT3m ACACT3m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT3r ACACT3r]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT4m ACACT4m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT4p ACACT4p]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT4r ACACT4r]
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−
* [http://bigg.ucsd.edu/universal/reactions/ACACT5m ACACT5m]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT5p ACACT5p]
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* [http://bigg.ucsd.edu/universal/reactions/ACACT5r ACACT5r]
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−
* [http://bigg.ucsd.edu/universal/reactions/ACACT6m ACACT6m]
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−
* [http://bigg.ucsd.edu/universal/reactions/ACACT6p ACACT6p]
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−
* [http://bigg.ucsd.edu/universal/reactions/ACACT6r ACACT6r]
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−
* [http://bigg.ucsd.edu/universal/reactions/ACACT7m ACACT7m]
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−
* [http://bigg.ucsd.edu/universal/reactions/ACACT7p ACACT7p]
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−
* [http://bigg.ucsd.edu/universal/reactions/ACACT7r ACACT7r]
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−
* [http://bigg.ucsd.edu/universal/reactions/ACALDh ACALDh]
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−
* [http://bigg.ucsd.edu/universal/reactions/BCOALIG BCOALIG]
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−
* [http://bigg.ucsd.edu/universal/reactions/BCOALIG2 BCOALIG2]
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−
* [http://bigg.ucsd.edu/universal/reactions/BZ12DOX BZ12DOX]
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−
* [http://bigg.ucsd.edu/universal/reactions/BZDIOLDH BZDIOLDH]
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−
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
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−
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
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−
* [http://bigg.ucsd.edu/universal/reactions/CAT23DOX CAT23DOX]
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−
* [http://bigg.ucsd.edu/universal/reactions/CATDOX CATDOX]
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* [http://bigg.ucsd.edu/universal/reactions/CHDCCH CHDCCH]
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−
* [http://bigg.ucsd.edu/universal/reactions/CMLDC CMLDC]
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−
* [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1 ECOAH1]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1_1 ECOAH1_1]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1m ECOAH1m]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH1x ECOAH1x]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH9ir ECOAH9ir]
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−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD1 HACD1]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD10p HACD10p]
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* [http://bigg.ucsd.edu/universal/reactions/HACD1_1 HACD1_1]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD1i HACD1i]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD1m HACD1m]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD1x HACD1x]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD2 HACD2]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD2_1 HACD2_1]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD2i HACD2i]
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* [http://bigg.ucsd.edu/universal/reactions/HACD2m HACD2m]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD3 HACD3]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD3_1 HACD3_1]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD3i HACD3i]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD3m HACD3m]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD4 HACD4]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD4i HACD4i]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD4m HACD4m]
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* [http://bigg.ucsd.edu/universal/reactions/HACD4p HACD4p]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD5 HACD5]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD5i HACD5i]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD5m HACD5m]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD5p HACD5p]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD6 HACD6]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD6i HACD6i]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD6m HACD6m]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD6p HACD6p]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD7 HACD7]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD7i HACD7i]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD7m HACD7m]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD7p HACD7p]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD9 HACD9]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACD9m HACD9m]
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−
* [http://bigg.ucsd.edu/universal/reactions/HACDp HACDp]
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−
* [http://bigg.ucsd.edu/universal/reactions/HADPCOADH3 HADPCOADH3]
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−
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp HBCO_nadp]
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−
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp_m HBCO_nadp_m]
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−
* [http://bigg.ucsd.edu/universal/reactions/HIBDkt HIBDkt]
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−
* [http://bigg.ucsd.edu/universal/reactions/HMNO HMNO]
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−
* [http://bigg.ucsd.edu/universal/reactions/HMSD HMSD]
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−
* [http://bigg.ucsd.edu/universal/reactions/HMSD2 HMSD2]
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−
* [http://bigg.ucsd.edu/universal/reactions/HMSH HMSH]
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−
* [http://bigg.ucsd.edu/universal/reactions/HMSH2 HMSH2]
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−
* [http://bigg.ucsd.edu/universal/reactions/HOCCD HOCCD]
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−
* [http://bigg.ucsd.edu/universal/reactions/HOPNTAL HOPNTAL]
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−
* [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
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−
* [http://bigg.ucsd.edu/universal/reactions/KATp KATp]
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−
* [http://bigg.ucsd.edu/universal/reactions/MACCOAT MACCOAT]
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−
* [http://bigg.ucsd.edu/universal/reactions/MUCCYCI MUCCYCI]
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−
* [http://bigg.ucsd.edu/universal/reactions/MUCCY_kt MUCCY_kt]
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−
* [http://bigg.ucsd.edu/universal/reactions/MUCLI MUCLI]
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−
* [http://bigg.ucsd.edu/universal/reactions/OCAALD OCAALD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCHCCH OCHCCH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OGCOAAT OGCOAAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OMAHY OMAHY]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OP4ENH OP4ENH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OXOAEL OXOAEL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PCADYOX PCADYOX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Benzoate degradation}}
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* RHEA:
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{{#set: reaction found=2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29239 29239]
−
{{#set: reaction not found=114}}
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* MetaNetX (MNX) Equation : MNXR105148
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{{#set: completion rate=2.0}}
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* BioCyc : META:TRANS-RXN-132
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Uracil transport in via proton symport}}
 +
{{#set: gene associated=EF1720|EF3000}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:09, 21 March 2018

Reaction URAt2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uracil transport in via proton symport
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 ura[e] + 1.0 h[e] => 1.0 ura[c] + 1.0 h[c]
  • With common name(s):
    • 1.0 Uracil[e] + 1.0 H+[e] => 1.0 Uracil[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR105148
  • BioCyc : META:TRANS-RXN-132




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