Difference between revisions of "Map00360"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EAR120x EAR120x] == * direction: ** LEFT-TO-RIGHT * common name: ** Enoyl-[acyl-carrier-protein] re...")
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360] == * common_name: ** Phenylalanine metabolism * Synonym(s): == Reaction(s) found =...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/EAR120x EAR120x] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Phenylalanine metabolism
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* common name:
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** Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:0)
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''109''' reactions in the full pathway
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** 1.0 [[tddec2eACP]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[ddcaACP]][c]
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* [[ACALD]]
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* With common name(s):
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** 1 associated gene(s):
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** 1.0 Trans-Dodec-2-enoyl-[acyl-carrier protein][c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Dodecanoyl-ACP (n-C12:0ACP)[c]
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*** [[EF0900]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-l_plantarum_wcfs1]]
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* [[EF0282]]
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* [[ALDD2x]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** 1 associated gene(s):
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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*** [[EF0253]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[ALDD2y]]
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* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
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** 1 associated gene(s):
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** '''36''' reactions found over '''182''' reactions in the full pathway
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*** [[EF0253]]
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* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
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** 1 reconstruction source(s) associated:
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** '''65''' reactions found over '''160''' reactions in the full pathway
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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== Reconstruction information  ==
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* [[ASPO1]]
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* [[orthology]]:
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** 1 associated gene(s):
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** [[pantograph]]:
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*** [[EF2556]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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** 1 reconstruction source(s) associated:
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*** [[l_plantarum_wcfs1]]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* [[ASPTA]]
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** 1 associated gene(s):
 +
*** [[EF2372]]
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** 2 reconstruction source(s) associated:
 +
*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** [[orthology-l_plantarum_wcfs1]]
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* [[PHETA1]]
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** 1 associated gene(s):
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*** [[EF1793]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[TYRCBOX]]
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** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/34DHPLACOX_NADP 34DHPLACOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX 34DHXMANDACOX]
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* [http://bigg.ucsd.edu/universal/reactions/34DHXMANDACOX_NADP 34DHXMANDACOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/3HCINNMH 3HCINNMH]
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* [http://bigg.ucsd.edu/universal/reactions/3HLYTCL 3HLYTCL]
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* [http://bigg.ucsd.edu/universal/reactions/3HPPPNH 3HPPPNH]
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* [http://bigg.ucsd.edu/universal/reactions/3HXKYNOXDA 3HXKYNOXDA]
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* [http://bigg.ucsd.edu/universal/reactions/3M4HDXPAC 3M4HDXPAC]
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* [http://bigg.ucsd.edu/universal/reactions/3MBZALDH 3MBZALDH]
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* [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX 3MOX4HOXPGALDOX]
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* [http://bigg.ucsd.edu/universal/reactions/3MOX4HOXPGALDOX_NADP 3MOX4HOXPGALDOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/3MOXTYROX 3MOXTYROX]
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* [http://bigg.ucsd.edu/universal/reactions/3OXCOAT 3OXCOAT]
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* [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
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* [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
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* [http://bigg.ucsd.edu/universal/reactions/41R1H2MAE12BOOX 41R1H2MAE12BOOX]
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* [http://bigg.ucsd.edu/universal/reactions/41R2A1H12BOOX 41R2A1H12BOOX]
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* [http://bigg.ucsd.edu/universal/reactions/4CMCOAS 4CMCOAS]
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* [http://bigg.ucsd.edu/universal/reactions/4HOXPACDOX_NADP 4HOXPACDOX_NADP]
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* [http://bigg.ucsd.edu/universal/reactions/4MBZALDH 4MBZALDH]
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* [http://bigg.ucsd.edu/universal/reactions/5HLTDL 5HLTDL]
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* [http://bigg.ucsd.edu/universal/reactions/5HOXINOXDA 5HOXINOXDA]
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* [http://bigg.ucsd.edu/universal/reactions/5HXKYNDCL 5HXKYNDCL]
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* [http://bigg.ucsd.edu/universal/reactions/5HXKYNOXDA 5HXKYNOXDA]
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* [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
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* [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
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* [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
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* [http://bigg.ucsd.edu/universal/reactions/ACALDh ACALDh]
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* [http://bigg.ucsd.edu/universal/reactions/ALATA_D ALATA_D]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD25xi ALCD25xi]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD25xim ALCD25xim]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD19x_P ALDD19x_P]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD19xr ALDD19xr]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20y ALDD20y]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD20ym ALDD20ym]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD22x ALDD22x]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD2xm ALDD2xm]
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* [http://bigg.ucsd.edu/universal/reactions/ALDD2ym ALDD2ym]
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* [http://bigg.ucsd.edu/universal/reactions/AMID AMID]
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* [http://bigg.ucsd.edu/universal/reactions/AMID2 AMID2]
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* [http://bigg.ucsd.edu/universal/reactions/AMID3 AMID3]
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* [http://bigg.ucsd.edu/universal/reactions/AMID4 AMID4]
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* [http://bigg.ucsd.edu/universal/reactions/AMID5 AMID5]
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* [http://bigg.ucsd.edu/universal/reactions/AMID_1 AMID_1]
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* [http://bigg.ucsd.edu/universal/reactions/AOOAh AOOAh]
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* [http://bigg.ucsd.edu/universal/reactions/APRTO2 APRTO2]
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* [http://bigg.ucsd.edu/universal/reactions/ARAT ARAT]
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* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
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* [http://bigg.ucsd.edu/universal/reactions/ASPOm ASPOm]
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* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
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* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
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* [http://bigg.ucsd.edu/universal/reactions/BZALDH BZALDH]
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* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
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* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
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* [http://bigg.ucsd.edu/universal/reactions/CAFFCOA CAFFCOA]
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* [http://bigg.ucsd.edu/universal/reactions/CINNDO CINNDO]
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* [http://bigg.ucsd.edu/universal/reactions/COUCOAFm COUCOAFm]
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* [http://bigg.ucsd.edu/universal/reactions/DDMCITALOR DDMCITALOR]
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* [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
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* [http://bigg.ucsd.edu/universal/reactions/DHCIND DHCIND]
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* [http://bigg.ucsd.edu/universal/reactions/DHCINDO DHCINDO]
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* [http://bigg.ucsd.edu/universal/reactions/DHCINDO_1 DHCINDO_1]
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* [http://bigg.ucsd.edu/universal/reactions/DHPPD DHPPD]
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* [http://bigg.ucsd.edu/universal/reactions/DMCITALOR DMCITALOR]
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* [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH9ir ECOAH9ir]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
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* [http://bigg.ucsd.edu/universal/reactions/FCOAHA FCOAHA]
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* [http://bigg.ucsd.edu/universal/reactions/HADPCOADH3 HADPCOADH3]
 +
* [http://bigg.ucsd.edu/universal/reactions/HDC HDC]
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* [http://bigg.ucsd.edu/universal/reactions/HISDC HISDC]
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* [http://bigg.ucsd.edu/universal/reactions/HKNDDH HKNDDH]
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* [http://bigg.ucsd.edu/universal/reactions/HKNDDH_1 HKNDDH_1]
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* [http://bigg.ucsd.edu/universal/reactions/HKNTDH HKNTDH]
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* [http://bigg.ucsd.edu/universal/reactions/HKNTDH_1 HKNTDH_1]
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* [http://bigg.ucsd.edu/universal/reactions/HOPNTAL HOPNTAL]
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* [http://bigg.ucsd.edu/universal/reactions/HPPPNDO HPPPNDO]
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* [http://bigg.ucsd.edu/universal/reactions/HPPPNDO_1 HPPPNDO_1]
 +
* [http://bigg.ucsd.edu/universal/reactions/HSTPT HSTPT]
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* [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
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* [http://bigg.ucsd.edu/universal/reactions/LTDCL LTDCL]
 +
* [http://bigg.ucsd.edu/universal/reactions/MAOLNOR MAOLNOR]
 +
* [http://bigg.ucsd.edu/universal/reactions/NBAH NBAH]
 +
* [http://bigg.ucsd.edu/universal/reactions/OMAHY OMAHY]
 +
* [http://bigg.ucsd.edu/universal/reactions/OP4ENH OP4ENH]
 +
* [http://bigg.ucsd.edu/universal/reactions/OXDHCOAT OXDHCOAT]
 +
* [http://bigg.ucsd.edu/universal/reactions/PACCOAL PACCOAL]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHACCOAGLNAC PHACCOAGLNAC]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHACTE PHACTE]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHETA1m PHETA1m]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHETHPTOX PHETHPTOX]
 +
* [http://bigg.ucsd.edu/universal/reactions/PHYCBOXL PHYCBOXL]
 +
* [http://bigg.ucsd.edu/universal/reactions/POATh POATh]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPOR PPOR]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPPNDO PPPNDO]
 +
* [http://bigg.ucsd.edu/universal/reactions/PPYRDC PPYRDC]
 +
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
 +
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
 
== External links  ==
 
== External links  ==
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* MetaNetX (MNX) Equation : MNXR97847
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{{#set: common_name=Phenylalanine metabolism}}
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* EC Number : 2.3.1.-
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{{#set: reaction found=7}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=109}}
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{{#set: common name=Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:0)}}
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{{#set: completion rate=6.0}}
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{{#set: gene associated=EF0282}}
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−
{{#set: in pathway=map01100|map01212|map00061}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
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Latest revision as of 15:09, 21 March 2018

Pathway map00360

  • common_name:
    • Phenylalanine metabolism
  • Synonym(s):

Reaction(s) found

7 reactions found over 109 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Map00360&oldid=8819"