Difference between revisions of "PPNCL"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK2 NDPK2] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:UDP...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPNCL PPNCL] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphopantothenate-cysteine ligase...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK2 NDPK2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPNCL PPNCL] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Nucleoside-diphosphate kinase (ATP:UDP)
+
** Phosphopantothenate-cysteine ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[udp]][c] '''<=>''' 1.0 [[utp]][c] '''+''' 1.0 [[adp]][c]
+
** 1.0 [[ctp]][c] '''+''' 1.0 [[4ppan]][c] '''+''' 1.0 [[cys__L]][c] '''=>''' 1.0 [[4ppcys]][c] '''+''' 1.0 [[cdp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 UDP C9H11N2O12P2[c] '''<=>''' 1.0 UTP C9H11N2O15P3[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
+
** 1.0 CTP C9H12N3O14P3[c] '''+''' 1.0 D-4'-Phosphopantothenate[c] '''+''' 1.0 L-Cysteine[c] '''=>''' 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] '''+''' 1.0 CDP C9H12N3O11P2[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1036]]
+
* Gene: [[EF2656]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
−
* [[EF0228]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''83''' reactions found over '''244''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
** '''17''' reactions found over '''75''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
−
** '''98''' reactions found over '''298''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR103118
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25098 25098]
+
* EC Number : 6.3.2.5
−
* BioCyc : META:UDPKIN-RXN
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* MetaNetX (MNX) Equation : MNXR101935
+
{{#set: common name=Phosphopantothenate-cysteine ligase}}
−
* KEGG Reaction : R00156
+
{{#set: gene associated=EF2656}}
−
* EC Number : 2.7.4.6
+
{{#set: in pathway=map01100|map00770}}
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Nucleoside-diphosphate kinase (ATP:UDP)}}
+
−
{{#set: gene associated=EF1036|EF0228}}
+
−
{{#set: in pathway=map00240|map01100|map01110|map00230|map01130}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:11, 21 March 2018

Reaction PPNCL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphopantothenate-cysteine ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 CTP C9H12N3O14P3[c] + 1.0 D-4'-Phosphopantothenate[c] + 1.0 L-Cysteine[c] => 1.0 N-((R)-4-Phosphopantothenoyl)-L-cysteine[c] + 1.0 CDP C9H12N3O11P2[c] + 1.0 Phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103118
  • EC Number : 6.3.2.5




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