Difference between revisions of "NDPK2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLNS GLNS] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamine synthetase * Synonym(s): =...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK2 NDPK2] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:UDP...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLNS GLNS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK2 NDPK2] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Glutamine synthetase
+
** Nucleoside-diphosphate kinase (ATP:UDP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nh4]][c] '''+''' 1.0 [[glu__L]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[gln__L]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[udp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[utp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Ammonium[c] '''+''' 1.0 L-Glutamate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 L-Glutamine[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 UDP C9H11N2O12P2[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 UTP C9H11N2O15P3[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2159]]
+
* Gene: [[EF0228]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
* Gene: [[EF1036]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** '''21''' reactions found over '''129''' reactions in the full pathway
+
** '''135''' reactions found over '''694''' reactions in the full pathway
−
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''9''' reactions found over '''65''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
** '''104''' reactions found over '''715''' reactions in the full pathway
+
** '''82''' reactions found over '''244''' reactions in the full pathway
−
* [[map00910]]: [http://www.genome.jp/dbget-bin/www_bget?map00910 map00910]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''5''' reactions found over '''36''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
+
−
** '''22''' reactions found over '''93''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16169 16169]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25098 25098]
−
* BioCyc : META:GLUTAMINESYN-RXN
+
* BioCyc : META:UDPKIN-RXN
−
* MetaNetX (MNX) Equation : MNXR100024
+
* MetaNetX (MNX) Equation : MNXR101935
−
* KEGG Reaction : R00253
+
* KEGG Reaction : R00156
−
* EC Number : 6.3.1.2
+
* EC Number : 2.7.4.6
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Glutamine synthetase}}
+
{{#set: common name=Nucleoside-diphosphate kinase (ATP:UDP)}}
−
{{#set: gene associated=EF2159}}
+
{{#set: gene associated=EF0228|EF1036}}
−
{{#set: in pathway=map01100|map00630|map00220|map01120|map00910|map00250}}
+
{{#set: in pathway=map01100|map01130|map01110|map00240|map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:11, 21 March 2018

Reaction NDPK2

  • direction:
    • REVERSIBLE
  • common name:
    • Nucleoside-diphosphate kinase (ATP:UDP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 UDP C9H11N2O12P2[c] <=> 1.0 ADP C10H12N5O10P2[c] + 1.0 UTP C9H11N2O15P3[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:UDPKIN-RXN
  • MetaNetX (MNX) Equation : MNXR101935
  • KEGG Reaction : R00156
  • EC Number : 2.7.4.6




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