Difference between revisions of "CYTDH"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACONT ACONT] == * direction: ** REVERSIBLE * common name: ** Aconitate hydratase * Synonym(s): ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTDH CYTDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytidine hydrolase * Synonym(s): =...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACONT ACONT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTDH CYTDH] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aconitate hydratase
+
** Cytidine hydrolase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[cit]][c] '''<=>''' 1.0 [[icit]][c]
+
** 1.0 [[cytd]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[csn]][c] '''+''' 1.0 [[rib__D]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Citrate[c] '''<=>''' 1.0 Isocitrate[c]
+
** 1.0 Cytidine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Cytosine[c] '''+''' 1.0 D-Ribose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF1921]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''25''' reactions found over '''129''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
−
** '''111''' reactions found over '''715''' reactions in the full pathway
+
−
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
+
−
** '''25''' reactions found over '''80''' reactions in the full pathway
+
−
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
+
−
** '''17''' reactions found over '''157''' reactions in the full pathway
+
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
−
** '''83''' reactions found over '''228''' reactions in the full pathway
+
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
+
−
** '''50''' reactions found over '''220''' reactions in the full pathway
+
−
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
+
−
** '''9''' reactions found over '''70''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10336 10336]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27958 27958]
−
* MetaNetX (MNX) Equation : MNXR95384
+
* BioCyc : META:RXN0-361
−
* KEGG Reaction : R01324
+
* MetaNetX (MNX) Equation : MNXR97040
−
* EC Number : 4.2.1.3
+
* KEGG Reaction : R02137
−
{{#set: direction=REVERSIBLE}}
+
* EC Number : 3.2.2.3
−
{{#set: common name=Aconitate hydratase}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: in pathway=map01100|map00630|map01110|map01120|map01210|map00720|map01230|map01200|map00020|map01130}}
+
{{#set: common name=Cytidine hydrolase}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: gene associated=EF1921}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: in pathway=map00240|map01100|map00230}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:11, 21 March 2018

Reaction CYTDH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cytidine hydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Cytidine[c] + 1.0 H2O H2O[c] => 1.0 Cytosine[c] + 1.0 D-Ribose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-361
  • MetaNetX (MNX) Equation : MNXR97040
  • KEGG Reaction : R02137
  • EC Number : 3.2.2.3




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