Difference between revisions of "GLUR"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MALt2_2 MALt2_2] == * direction: ** LEFT-TO-RIGHT * common name: ** Malate transport via proton sym...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLUR GLUR] == * direction: ** REVERSIBLE * common name: ** Glutamate racemase * Synonym(s): == Rea...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MALt2_2 MALt2_2] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GLUR GLUR] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Malate transport via proton symport (2 H)
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** Glutamate racemase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[mal__L]][e] '''+''' 2.0 [[h]][e] '''=>''' 1.0 [[mal__L]][c] '''+''' 2.0 [[h]][c]
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** 1.0 [[glu__D]][c] '''<=>''' 1.0 [[glu__L]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Malate[e] '''+''' 2.0 H+[e] '''=>''' 1.0 L-Malate[c] '''+''' 2.0 H+[c]
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** 1.0 D-Glutamate[c] '''<=>''' 1.0 L-Glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0387]]
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* Gene: [[EF1121]]
** MANUAL
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** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00471]]: [http://www.genome.jp/dbget-bin/www_bget?map00471 map00471]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
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* Category: [[orthology]]
** [[this was a reaction occurring in the perisplasm of e. coli]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29339 29339]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12813 12813]
* MetaNetX (MNX) Equation : MNXR101370
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* BioCyc : META:GLUTRACE-RXN
* BioCyc : META:TRANS-RXN-121A
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* MetaNetX (MNX) Equation : MNXR100288
{{#set: direction=LEFT-TO-RIGHT}}
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* KEGG Reaction : R00260
{{#set: common name=Malate transport via proton symport (2 H)}}
+
* EC Number : 5.1.1.3
{{#set: gene associated=EF0387}}
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{{#set: direction=REVERSIBLE}}
{{#set: in pathway=}}
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{{#set: common name=Glutamate racemase}}
{{#set: reconstruction category=manual}}
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{{#set: gene associated=EF1121}}
{{#set: reconstruction source=this was a reaction occurring in the perisplasm of e. coli}}
+
{{#set: in pathway=map01100|map00471}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:12, 21 March 2018

Reaction GLUR

  • direction:
    • REVERSIBLE
  • common name:
    • Glutamate racemase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glutamate[c] <=> 1.0 L-Glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:GLUTRACE-RXN
  • MetaNetX (MNX) Equation : MNXR100288
  • KEGG Reaction : R00260
  • EC Number : 5.1.1.3