Difference between revisions of "ICHORS copy1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD60 3HAD60] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier-prote...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS_copy1 ICHORS_copy1] == * direction: ** REVERSIBLE * common name: ** Isochorismate synthase *...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD60 3HAD60] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS_copy1 ICHORS_copy1] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C6:0)
+
** Isochorismate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[3hhexACP]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[thex2eACP]][c]
+
** 1.0 [[chor]][c] '''<=>''' 1.0 [[ichor]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 (R)-3-Hydroxyhexanoyl-[acyl-carrier protein][c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Trans-Hex-2-enoyl-[acyl-carrier protein][c]
+
** 1.0 Chorismate[c] '''<=>''' 1.0 Isochorismate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2878]]
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* Gene: [[EF0447]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[EF0284]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
 
** '''30''' reactions found over '''67''' reactions in the full pathway
 
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
 
** '''36''' reactions found over '''182''' reactions in the full pathway
 
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
 
** '''65''' reactions found over '''160''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-curation_from_orthology]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR94887
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{{#set: direction=REVERSIBLE}}
* KEGG Reaction : R04954
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{{#set: common name=Isochorismate synthase}}
* EC Number : 2.3.1.-
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{{#set: gene associated=EF0447}}
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: in pathway=}}
{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C6:0)}}
+
{{#set: reconstruction category=orthology|manual}}
{{#set: gene associated=EF2878|EF0284}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|manual-curation_from_orthology}}
{{#set: in pathway=map01100|map00780|map01212|map00061}}
+
{{#set: reconstruction category=orthology}}
+
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Latest revision as of 15:12, 21 March 2018

Reaction ICHORS_copy1

  • direction:
    • REVERSIBLE
  • common name:
    • Isochorismate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Chorismate[c] <=> 1.0 Isochorismate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links