Difference between revisions of "PYROX"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTOM CYTOM] == * direction: ** REVERSIBLE * common name: ** Cytosine 5 methyltransferase * Synonym...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PYROX PYROX] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyrimidine oxygenase * Synonym(s):...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTOM CYTOM] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PYROX PYROX] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Cytosine 5 methyltransferase
+
** Pyrimidine oxygenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[csn]][c] '''+''' 1.0 [[amet]][c] '''<=>''' 1.0 [[ahcys]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[5mcsn]][c]
+
** 1.0 [[ura]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[o2]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[uracp]][c] '''+''' 1.0 [[nad]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Cytosine[c] '''+''' 1.0 S-Adenosyl-L-methionine[c] '''<=>''' 1.0 S-Adenosyl-L-homocysteine[c] '''+''' 1.0 H+[c] '''+''' 1.0 5-Methylcytosine[c]
+
** 1.0 Uracil[c] '''+''' 1.0 H+[c] '''+''' 1.0 O2 O2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''=>''' 1.0 Ureidoacrylate peracid[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF2340]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[gap-filling]]
** [[pantograph]]:
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR97062
+
* MetaNetX (MNX) Equation : MNXR103383
* EC Number : 2.1.1.37
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Pyrimidine oxygenase}}
{{#set: common name=Cytosine 5 methyltransferase}}
+
{{#set: gene associated=EF2340}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction tool=meneco}}
 +
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:13, 21 March 2018

Reaction PYROX

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyrimidine oxygenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Uracil[c] + 1.0 H+[c] + 1.0 O2 O2[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] => 1.0 Ureidoacrylate peracid[c] + 1.0 Nicotinamide adenine dinucleotide[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103383