Difference between revisions of "CHORS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMPPP TMPPP] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiamine-phosphate diphosphorylase...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CHORS CHORS] == * direction: ** LEFT-TO-RIGHT * common name: ** Chorismate synthase * Synonym(s):...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TMPPP TMPPP] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CHORS CHORS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Thiamine-phosphate diphosphorylase
+
** Chorismate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[4mpetz]][c] '''+''' 1.0 [[2mahmp]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[thmmp]][c] '''+''' 1.0 [[ppi]][c]
+
** 1.0 [[3psme]][c] '''=>''' 1.0 [[chor]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 4-Methyl-5-(2-phosphoethyl)-thiazole[c] '''+''' 1.0 2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Thiamin monophosphate[c] '''+''' 1.0 Diphosphate[c]
+
** 1.0 5-O-(1-Carboxyvinyl)-3-phosphoshikimate[c] '''=>''' 1.0 Chorismate[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2776]]
+
* Gene: [[EF1564]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
 
−
** '''11''' reactions found over '''24''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
 +
** '''13''' reactions found over '''59''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22328 22328]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21020 21020]
−
* BioCyc : META:THI-P-SYN-RXN
+
* BioCyc : META:CHORISMATE-SYNTHASE-RXN
−
* MetaNetX (MNX) Equation : MNXR104908
+
* MetaNetX (MNX) Equation : MNXR96709
−
* KEGG Reaction : R03223
+
* KEGG Reaction : R01714
−
* EC Number : 2.5.1.3
+
* EC Number : 4.2.3.5
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Thiamine-phosphate diphosphorylase}}
+
{{#set: common name=Chorismate synthase}}
−
{{#set: gene associated=EF2776}}
+
{{#set: gene associated=EF1564}}
−
{{#set: in pathway=map00730|map01100}}
+
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:17, 21 March 2018

Reaction CHORS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Chorismate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5-O-(1-Carboxyvinyl)-3-phosphoshikimate[c] => 1.0 Chorismate[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:CHORISMATE-SYNTHASE-RXN
  • MetaNetX (MNX) Equation : MNXR96709
  • KEGG Reaction : R01714
  • EC Number : 4.2.3.5




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