Difference between revisions of "OMPDC"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/THRA2i THRA2i] == * direction: ** LEFT-TO-RIGHT * common name: ** L-allo-Threonine Aldolase * Synon...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OMPDC OMPDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Orotidine-5'-phosphate decarboxylas...") |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/OMPDC OMPDC] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Orotidine-5'-phosphate decarboxylase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[orot5p]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[ump]][c] '''+''' 1.0 [[co2]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Orotidine 5'-phosphate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 UMP C9H11N2O9P[c] '''+''' 1.0 CO2 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF1713]] |
| − | ** [[ | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240] | ||
| + | ** '''82''' reactions found over '''244''' reactions in the full pathway | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | * [[ | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| − | ** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * EC Number : 4.1.1.23 | ||
| + | * BioCyc : META:OROTPDECARB-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR102190 | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11596 11596] | ||
| + | * Reactome : REACT_R-ATH-73564 | ||
| + | * KEGG Reaction : R00965 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Orotidine-5'-phosphate decarboxylase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF1713}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=map00240|map01100}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
| − | |||
| − | |||
Latest revision as of 15:18, 21 March 2018
Contents
Reaction OMPDC
- direction:
- LEFT-TO-RIGHT
- common name:
- Orotidine-5'-phosphate decarboxylase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Orotidine 5'-phosphate[c] + 1.0 H+[c] => 1.0 UMP C9H11N2O9P[c] + 1.0 CO2 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF1713
Pathways
- map00240: map00240
- 82 reactions found over 244 reactions in the full pathway
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- EC Number : 4.1.1.23
- BioCyc : META:OROTPDECARB-RXN
- MetaNetX (MNX) Equation : MNXR102190
- RHEA:
- Reactome : REACT_R-ATH-73564
- KEGG Reaction : R00965
