Difference between revisions of "DADA"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FCLT FCLT] == * direction: ** LEFT-TO-RIGHT * common name: ** Ferrochelatase * Synonym(s): == Reac...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DADA DADA] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyadenosine deaminase * Synonym(s)...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/FCLT FCLT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DADA DADA] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Ferrochelatase
+
** Deoxyadenosine deaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[ppp9]][c] '''+''' 1.0 [[fe2]][c] '''=>''' 1.0 [[pheme]][c] '''+''' 2.0 [[h]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[dad_2]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[din]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Protoporphyrin[c] '''+''' 1.0 Fe2+ mitochondria[c] '''=>''' 1.0 Protoheme C34H30FeN4O4[c] '''+''' 2.0 H+[c]
+
** 1.0 H+[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Deoxyadenosine[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Deoxyinosine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1989]]
+
* Gene: [[EF0171]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
+
** '''4''' reactions found over '''106''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28190 28190]
* BioCyc : META:PROTOHEMEFERROCHELAT-RXN
+
* BioCyc : META:ADDALT-RXN
* MetaNetX (MNX) Equation : MNXR99471
+
* MetaNetX (MNX) Equation : MNXR97076
* KEGG Reaction : R00310
+
* KEGG Reaction : R02556
* EC Number : 4.99.1.1
+
* EC Number : 3.5.4.4
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Ferrochelatase}}
+
{{#set: common name=Deoxyadenosine deaminase}}
{{#set: gene associated=EF1989}}
+
{{#set: gene associated=EF0171}}
{{#set: in pathway=map01100|map01110|map00860}}
+
{{#set: in pathway=map01100|map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Latest revision as of 15:19, 21 March 2018

Reaction DADA

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Deoxyadenosine deaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 H2O H2O[c] + 1.0 Deoxyadenosine[c] => 1.0 Ammonium[c] + 1.0 Deoxyinosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ADDALT-RXN
  • MetaNetX (MNX) Equation : MNXR97076
  • KEGG Reaction : R02556
  • EC Number : 3.5.4.4