Difference between revisions of "ExchangeSeed ribflv"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GARFT GARFT] == * direction: ** REVERSIBLE * common name: ** Phosphoribosylglycinamide formyltransf...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ribflv ExchangeSeed_ribflv] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GARFT GARFT] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_ribflv ExchangeSeed_ribflv] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** Phosphoribosylglycinamide formyltransferase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[10fthf]][c] '''+''' 1.0 [[gar]][c] '''<=>''' 1.0 [[fgam]][c] '''+''' 1.0 [[thf]][c] '''+''' 1.0 [[h]][c]
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** 1.0 [[ribflv]][C-BOUNDARY] '''<=>''' 1.0 [[ribflv]][e]
 
* With common name(s):
 
* With common name(s):
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** 1.0 10-Formyltetrahydrofolate[c] '''+''' 1.0 N1-(5-Phospho-D-ribosyl)glycinamide[c] '''<=>''' 1.0 N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide[c] '''+''' 1.0 5,6,7,8-Tetrahydrofolate[c] '''+''' 1.0 H+[c]
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** 1.0 Riboflavin C17H20N4O6[C-BOUNDARY] '''<=>''' 1.0 Riboflavin C17H20N4O6[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF1779]]
 
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** [[pantograph]]-[[l_plantarum_wcfs1]]
 
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
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** '''508''' reactions found over '''2349''' reactions in the full pathway
 
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
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** '''156''' reactions found over '''694''' reactions in the full pathway
 
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
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** '''218''' reactions found over '''1054''' reactions in the full pathway
 
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* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
 
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** '''14''' reactions found over '''65''' reactions in the full pathway
 
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* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
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** '''98''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
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** [[pantograph]]:
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** Source: [[manual-import_from_medium]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
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*** [[l_plantarum_wcfs1]]
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−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15053 15053]
 
−
* MetaNetX (MNX) Equation : MNXR99623
 
−
* KEGG Reaction : R04325
 
−
* EC Number : 2.1.2.2
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoribosylglycinamide formyltransferase}}
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{{#set: in pathway=}}
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{{#set: gene associated=EF1779}}
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{{#set: reconstruction category=manual}}
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{{#set: in pathway=map01100|map01130|map01110|map00670|map00230}}
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{{#set: reconstruction source=manual-import_from_medium}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
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{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+

Latest revision as of 15:20, 21 March 2018

Reaction ExchangeSeed_ribflv

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Riboflavin C17H20N4O6[C-BOUNDARY] <=> 1.0 Riboflavin C17H20N4O6[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links

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