Difference between revisions of "AGDC"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/mal__L mal__L] == * common name: ** L-Malate * Synonym(s): == Reaction(s) known to consume t...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGDC AGDC] == * direction: ** LEFT-TO-RIGHT * common name: ** N-acetylglucosamine-6-phosphate deace...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/AGDC AGDC] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** N-acetylglucosamine-6-phosphate deacetylase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * [[ | + | ** 1.0 [[acgam6p]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[ac]][c] '''+''' 1.0 [[gam6p]][c] |
| − | * [[ | + | * With common name(s): |
| − | * [[ | + | ** 1.0 N-Acetyl-D-glucosamine 6-phosphate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Acetate[c] '''+''' 1.0 D-Glucosamine 6-phosphate[c] |
| − | * [[ | + | |
| − | == | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[ | + | * Gene: [[EF3044]] |
| − | * [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | == | + | * Gene: [[EF1317]] |
| − | * [[ | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | * [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | == Pathways == | ||
| + | * [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520] | ||
| + | ** '''24''' reactions found over '''80''' reactions in the full pathway | ||
| + | * [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052] | ||
| + | ** '''17''' reactions found over '''67''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''135''' reactions found over '''694''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22936 22936] |
| − | {{#set: | + | * BioCyc : META:NAG6PDEACET-RXN |
| − | {{#set: | + | * MetaNetX (MNX) Equation : MNXR95528 |
| + | * KEGG Reaction : R02059 | ||
| + | * EC Number : 3.5.1.25 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=N-acetylglucosamine-6-phosphate deacetylase}} | ||
| + | {{#set: gene associated=EF3044|EF1317}} | ||
| + | {{#set: in pathway=map00520|map00052|map01130}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:22, 21 March 2018
Contents
Reaction AGDC
- direction:
- LEFT-TO-RIGHT
- common name:
- N-acetylglucosamine-6-phosphate deacetylase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 N-Acetyl-D-glucosamine 6-phosphate[c] + 1.0 H2O H2O[c] => 1.0 Acetate[c] + 1.0 D-Glucosamine 6-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map00520: map00520
- 24 reactions found over 80 reactions in the full pathway
- map00052: map00052
- 17 reactions found over 67 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:NAG6PDEACET-RXN
- MetaNetX (MNX) Equation : MNXR95528
- KEGG Reaction : R02059
- EC Number : 3.5.1.25
