Difference between revisions of "RBT5PDHy"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TDPDRE TDPDRE] == * direction: ** LEFT-TO-RIGHT * common name: ** DTDP-4-dehydrorhamnose 3,5-epimer...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RBT5PDHy RBT5PDHy] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ident...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TDPDRE TDPDRE] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/RBT5PDHy RBT5PDHy] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** DTDP-4-dehydrorhamnose 3,5-epimerase
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dtdp4d6dg]][c] '''=>''' 1.0 [[dtdp4d6dm]][c]
+
** 1.0 [[nadp]][c] '''+''' 1.0 [[rbt5p]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[ru5p__D]][c] '''+''' 1.0 [[nadph]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 DTDP-4-dehydro-6-deoxy-D-glucose[c] '''=>''' 1.0 DTDP-4-dehydro-6-deoxy-L-mannose[c]
+
** 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 D_Ribitol_5_phosphate[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 D-Ribulose 5-phosphate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF2193]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00521]]: [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
 
−
** '''7''' reactions found over '''14''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00523]]: [http://www.genome.jp/dbget-bin/www_bget?map00523 map00523]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-1_new_rxn_for_biomass]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Comment: [[reaction added for biomass, from model l.plantarum]]
−
*** [[l_plantarum_wcfs1]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16969 16969]
+
{{#set: in pathway=}}
−
* BioCyc : META:DTDPDEHYDRHAMEPIM-RXN
+
{{#set: reconstruction category=manual}}
−
* MetaNetX (MNX) Equation : MNXR104759
+
{{#set: reconstruction source=manual-1_new_rxn_for_biomass}}
−
* KEGG Reaction : R06514
+
{{#set: reconstruction comment=reaction added for biomass, from model l.plantarum}}
−
* EC Number : 5.1.3.13
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=DTDP-4-dehydrorhamnose 3,5-epimerase}}
+
−
{{#set: gene associated=EF2193}}
+
−
{{#set: in pathway=map00521|map01130|map00523}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
+

Latest revision as of 15:23, 21 March 2018

Reaction RBT5PDHy

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 D_Ribitol_5_phosphate[c] <=> 1.0 H+[c] + 1.0 D-Ribulose 5-phosphate[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=RBT5PDHy&oldid=9953"