Difference between revisions of "ME1"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_lipoate ExchangeSeed_lipoate] == * direction: ** REVERSIBLE * Synonym(s): == Reaction...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ME1 ME1] == * direction: ** LEFT-TO-RIGHT * common name: ** Malic enzyme (NAD) * Synonym(s): == Re...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/ME1 ME1] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
| + | * common name: | ||
| + | ** Malic enzyme (NAD) | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[nad]][c] '''+''' 1.0 [[mal__L]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[pyr]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 L-Malate[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 Pyruvate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[EF3316]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200] | ||
| + | ** '''45''' reactions found over '''220''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''104''' reactions found over '''715''' reactions in the full pathway | ||
| + | * [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710] | ||
| + | ** '''16''' reactions found over '''71''' reactions in the full pathway | ||
| + | * [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620] | ||
| + | ** '''31''' reactions found over '''163''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| − | {{#set: in pathway=}} | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12653 12653] |
| − | {{#set: reconstruction category= | + | * BioCyc : META:1.1.1.39-RXN |
| − | {{#set: reconstruction source= | + | * MetaNetX (MNX) Equation : MNXR101446 |
| + | * KEGG Reaction : R00214 | ||
| + | * EC Number : 1.1.1.38 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Malic enzyme (NAD)}} | ||
| + | {{#set: gene associated=EF3316}} | ||
| + | {{#set: in pathway=map01100|map01200|map01120|map00710|map00620}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:19, 21 March 2018
Contents
Reaction ME1
- direction:
- LEFT-TO-RIGHT
- common name:
- Malic enzyme (NAD)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 L-Malate[c] => 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 CO2 CO2[c] + 1.0 Pyruvate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF3316
- Source: orthology-l_plantarum_wcfs1
- Source: orthology-e_coli_sstr_k12_substr_mg1655
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01200: map01200
- 45 reactions found over 220 reactions in the full pathway
- map01120: map01120
- 104 reactions found over 715 reactions in the full pathway
- map00710: map00710
- 16 reactions found over 71 reactions in the full pathway
- map00620: map00620
- 31 reactions found over 163 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:1.1.1.39-RXN
- MetaNetX (MNX) Equation : MNXR101446
- KEGG Reaction : R00214
- EC Number : 1.1.1.38
