Difference between revisions of "GLUTRS"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/h2o h2o] == * common name: ** H2O H2O * Synonym(s): == Reaction(s) known to consume the comp...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLUTRS GLUTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamyl-tRNA synthetase * Synony...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/h2o h2o] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLUTRS GLUTRS] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** H2O H2O
+
** Glutamyl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[CSND]]
+
* With identifiers:
* [[NTPP11]]
+
** 1.0 [[glu__L]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[trnaglu]][c] '''=>''' 1.0 [[glutrna]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c]
* [[NTPP10]]
+
* With common name(s):
* [[MDDCP2ppc]]
+
** 1.0 L-Glutamate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 TRNA (Glu)[c] '''=>''' 1.0 L-Glutamyl-tRNA(Glu)[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
* [[CYTD]]
+
 
* [[MLTG5]]
+
== Genes associated with this reaction  ==
* [[MANPGH]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[NTP10]]
+
* Gene: [[EF0043]]
* [[ALDD31_1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
* [[NTD10]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[ALDD3y]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
* [[SFGTHi]]
+
== Pathways  ==
* [[PPTHppc]]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
* [[CYSTGL]]
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[GLYBabc]]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
* [[XTSNH]]
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
* [[DDPA]]
+
* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
* [[GNNUC]]
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** '''4''' reactions found over '''106''' reactions in the full pathway
* [[GLYO1]]
+
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
* [[PRAMPC_1]]
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** '''104''' reactions found over '''715''' reactions in the full pathway
* [[URIH]]
+
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
* [[ALLTN]]
+
** '''23''' reactions found over '''49''' reactions in the full pathway
* [[HISTD]]
+
== Reconstruction information  ==
* [[BGLA1]]
+
* Category: [[orthology]]
* [[PRFGS_1]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[TDP]]
+
*** Tool: [[pantograph]]
* [[THDPS]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
* [[IMPD]]
+
*** Tool: [[pantograph]]
* [[NADDP]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
* [[G2PP]]
+
*** Tool: [[pantograph]]
* [[PPGPPDP]]
+
* [[THRS]]
+
* [[SPMDabc]]
+
* [[APH140]]
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* [[ALDD9]]
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* [[ASCBPL]]
+
* [[ALDD3]]
+
* [[ALDD4]]
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* [[ALDD5]]
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* [[ALDD6]]
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* [[AASAD3]]
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* [[TECA2S45]]
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* [[PURabc1]]
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* [[PGLYCP]]
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* [[AHCYSNS]]
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* [[PRATPP]]
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* [[ALDD32]]
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* [[AGDC]]
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* [[PRFGS]]
+
* [[SPMDOX]]
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* [[ASNS1]]
+
* [[CA2abc1]]
+
* [[NTPP9]]
+
* [[URACPAH]]
+
* [[MPTS_LPL]]
+
* [[RHC]]
+
* [[NTPP4]]
+
* [[CMPDAi]]
+
* [[PTRCOX1]]
+
* [[THPAT]]
+
* [[XAND]]
+
* [[SUCR]]
+
* [[DNTPPA_1]]
+
* [[NTP3]]
+
* [[HP]]
+
* [[NTP1]]
+
* [[TransportSeed_h2o]]
+
* [[DC6PH]]
+
* [[NTP5]]
+
* [[GLUN]]
+
* [[NO3abc]]
+
* [[GLXO1]]
+
* [[CD2abc1]]
+
* [[SSALy]]
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* [[5DOAN]]
+
* [[HDH]]
+
* [[LCADi]]
+
* [[DAPAL]]
+
* [[ACM6PH]]
+
* [[MALT]]
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* [[NTD9]]
+
* [[FMETDF]]
+
* [[CYTDH]]
+
* [[NTD7]]
+
* [[MOADCST]]
+
* [[X00002]]
+
* [[ADNUC]]
+
* [[AP4AH]]
+
* [[DNAS_LPL]]
+
* [[GDPTPDP]]
+
* [[ARSENBabc]]
+
* [[NIabc]]
+
* [[G6PDA]]
+
* [[APH120]]
+
* [[GTPCI]]
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* [[PTRCabc]]
+
* [[ALDD2y]]
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* [[ALDD2x]]
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* [[2MAHMP]]
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* [[AASDH1_c]]
+
* [[MLTG4]]
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* [[MLTG7]]
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* [[MLTG6]]
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* [[MLTG1]]
+
* [[MLTG3]]
+
* [[MLTG2]]
+
* [[MG2abc]]
+
* [[GCALDD]]
+
* [[ZNabc]]
+
* [[HXAND]]
+
* [[METDabc]]
+
* [[biomass_LPL60]]
+
* [[NTPP3]]
+
* [[METSRabc]]
+
* [[PPA]]
+
* [[MDDCP5ppc]]
+
* [[SELNPS]]
+
* [[CHLabc]]
+
* [[METAT]]
+
* [[LIPO3S24_BS]]
+
* [[ARGabc]]
+
* [[ADPDS_manual]]
+
* [[NADN]]
+
* [[GMPS2]]
+
* [[HMGCOASi]]
+
* [[MALTabc]]
+
* [[BG_MADG]]
+
* [[MDDCP1ppc]]
+
* [[GGGABAH]]
+
* [[NMNHYD]]
+
* [[PROTS_LPL_v60]]
+
* [[DCYTD]]
+
* [[BG_MBDG]]
+
* [[TMN]]
+
* [[GDPMNP]]
+
* [[AP5AH]]
+
* [[NMNDA]]
+
* [[CTPS2]]
+
* [[MDDCP3ppc]]
+
* [[CRNabc]]
+
* [[MNabc]]
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* [[MDDCP4ppc]]
+
* [[AKP1]]
+
* [[AB6PGH]]
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* [[RAFH]]
+
* [[S6PG]]
+
* [[Cut1]]
+
* [[MI1PP]]
+
* [[AHMMPS_LPL]]
+
* [[AIRC1]]
+
* [[CBPS]]
+
* [[MOHMT]]
+
* [[KDOPS]]
+
* [[HISTP]]
+
* [[FFSD]]
+
* [[ALDD20x_1]]
+
* [[ADD]]
+
* [[UDCPDP]]
+
* [[NADPN]]
+
* [[ADA]]
+
* [[CS]]
+
* [[GLNabc]]
+
* [[HYPOE]]
+
* [[FBP]]
+
* [[ALDD4x]]
+
* [[BLUB]]
+
* [[PGPP_LPL]]
+
* [[SSALx]]
+
* [[GP4GH]]
+
* [[ASNN]]
+
* [[RNAS_LPL]]
+
* [[FERRICHabc]]
+
* [[NTD8]]
+
* [[ASPO1]]
+
* [[NMNN]]
+
* [[THFAT]]
+
* [[CYSTL]]
+
* [[TRPAS1]]
+
* [[ALDD8]]
+
* [[GUAD]]
+
* [[SDPDS]]
+
* [[APH141]]
+
* [[INSH]]
+
* [[DADA]]
+
* [[FERXAabc]]
+
* [[COBALT2abcpppe]]
+
* [[NNAM]]
+
* [[CPMPS]]
+
* [[PIabc]]
+
* [[METabc]]
+
* [[ECTOINEabc]]
+
* [[CYSabc2pppe]]
+
* [[ACYP_2]]
+
* [[DAAOP]]
+
* [[POX]]
+
* [[ACODA_1]]
+
* [[PGL]]
+
* [[CHOLSabc_1]]
+
* [[APH180]]
+
* [[APH181]]
+
* [[ADPRDP]]
+
* [[PPS]]
+
* [[LACZ]]
+
* [[AASS_c]]
+
* [[GLUPRT]]
+
* [[ALDD1]]
+
* [[GPDDA4]]
+
* [[GPDDA5]]
+
* [[GBBTNabc]]
+
* [[GPDDA1]]
+
* [[GPDDA2]]
+
* [[GPDDA3]]
+
* [[MTAN]]
+
* [[ABUTD]]
+
* [[IPPS]]
+
* [[APH160]]
+
* [[APH161]]
+
* [[NTD6]]
+
* [[3AMACHYD]]
+
* [[NTD4]]
+
* [[NTD5]]
+
* [[NTD2]]
+
* [[NTD3]]
+
* [[TRE6PH]]
+
* [[NTD1]]
+
* [[ALDD12]]
+
* [[ALDD13]]
+
* [[ALDD10]]
+
* [[ALDD11]]
+
* [[ALDD16]]
+
* [[ALDD17]]
+
* [[ALDD14]]
+
* [[ALDD15]]
+
* [[CYSTGL_1]]
+
* [[ALDD18]]
+
* [[ALAALAD]]
+
* [[METSabc]]
+
* [[NI2abcpppe]]
+
* [[ZN2abcpppe]]
+
* [[CTBTabc]]
+
* [[ALKP]]
+
* [[ALLTAMH]]
+
* [[PRAMPC]]
+
* [[PROLBabc]]
+
* [[BG_CELLB]]
+
* [[PENCAC]]
+
* [[ACP1_FMN]]
+
* [[ALDD7]]
+
* [[NTPTP1]]
+
* [[NTPTP2]]
+
* [[DUTPDP]]
+
== Reaction(s) known to produce the compound ==
+
* [[WCOS]]
+
* [[3HAD120]]
+
* [[3HAD121]]
+
* [[CPPPGO]]
+
* [[NADHPO]]
+
* [[OPMEACPD]]
+
* [[SUCBZS]]
+
* [[HBUHL1_manual]]
+
* [[CYTB_B2]]
+
* [[RNTR2]]
+
* [[CAT]]
+
* [[METSR_S1]]
+
* [[MNNH]]
+
* [[3HAD140]]
+
* [[3HAD141]]
+
* [[3HAD100]]
+
* [[PHETHPTOX]]
+
* [[CSPMDDH]]
+
* [[IGPS]]
+
* [[3HAD160]]
+
* [[3HAD161]]
+
* [[OGMEACPD]]
+
* [[3HAD180]]
+
* [[PKETF]]
+
* [[METSR_R2]]
+
* [[DHQTi]]
+
* [[METSR_R1]]
+
* [[FAS120]]
+
* [[CYSTS_2]]
+
* [[KAS2]]
+
* [[RNDR4]]
+
* [[METSOXR2]]
+
* [[METSOXR1]]
+
* [[PYDXS]]
+
* [[HHYHL2_manual]]
+
* [[FAS140]]
+
* [[ICH]]
+
* [[RNTR3]]
+
* [[RNDR1]]
+
* [[RNTR1]]
+
* [[FAS100]]
+
* [[FOMETRi]]
+
* [[KAS17]]
+
* [[CYTBD]]
+
* [[DHDPS]]
+
* [[TransportSeed_h2o]]
+
* [[G5SADs]]
+
* [[RNTR4]]
+
* [[TRPS1]]
+
* [[IGPDH]]
+
* [[DHNCOAS]]
+
* [[DMBZIDS2]]
+
* [[METSR_S2]]
+
* [[3HAD80]]
+
* [[DHAD1]]
+
* [[DHAD2]]
+
* [[FAS80_L]]
+
* [[PLPS]]
+
* [[MOCOS]]
+
* [[ANS2]]
+
* [[PPNDH]]
+
* [[SACCD_c]]
+
* [[3HAD40]]
+
* [[3HAD181]]
+
* [[NOX2]]
+
* [[RNDR3]]
+
* [[RNDR2]]
+
* [[3HAD60]]
+
* [[IGPDH_1]]
+
* [[KAS13]]
+
* [[TDPGDH]]
+
== Reaction(s) of unknown directionality ==
+
* [[GHMT2r]]
+
* [[GLXO3r]]
+
* [[GLUDxi]]
+
* [[ATPS3r]]
+
* [[HMGCOAS]]
+
* [[3NUCLE1]]
+
* [[3NUCLE3]]
+
* [[3NUCLE2]]
+
* [[GLYDHDA]]
+
* [[3NUCLE4]]
+
* [[GLUDy]]
+
* [[DBRC]]
+
* [[IMPC]]
+
* [[ExchangeSeed_h2o]]
+
* [[FRULYSDG]]
+
* [[GLNTAL]]
+
* [[DCMPDA]]
+
* [[PKL]]
+
* [[UAG2EMA]]
+
* [[CPSS_LPL2]]
+
* [[MCSNAH]]
+
* [[23CN2P3]]
+
* [[23CN2P2]]
+
* [[23CN2P1]]
+
* [[23CN2P4]]
+
* [[ACONTa]]
+
* [[ACONTb]]
+
* [[APATi]]
+
* [[MTHFC]]
+
* [[ENO]]
+
* [[IPPMIb]]
+
* [[IPPMIa]]
+
* [[E4PD]]
+
* [[ADPDA]]
+
* [[GLYALDDr]]
+
* [[SACCD1]]
+
* [[SACCD2]]
+
* [[HCO3E]]
+
* [[BZDH]]
+
* [[DHORTS]]
+
 
== External links  ==
 
== External links  ==
{{#set: common name=H2O H2O}}
+
* Reactome : REACT_R-HSA-379861
{{#set: consumed by=CSND|NTPP11|NTPP10|MDDCP2ppc|CYTD|MLTG5|MANPGH|NTP10|ALDD31_1|NTD10|ALDD3y|SFGTHi|PPTHppc|CYSTGL|GLYBabc|XTSNH|DDPA|GNNUC|GLYO1|PRAMPC_1|URIH|ALLTN|HISTD|BGLA1|PRFGS_1|TDP|THDPS|IMPD|NADDP|G2PP|PPGPPDP|THRS|SPMDabc|APH140|ALDD9|ASCBPL|ALDD3|ALDD4|ALDD5|ALDD6|AASAD3|TECA2S45|PURabc1|PGLYCP|AHCYSNS|PRATPP|ALDD32|AGDC|PRFGS|SPMDOX|ASNS1|CA2abc1|NTPP9|URACPAH|MPTS_LPL|RHC|NTPP4|CMPDAi|PTRCOX1|THPAT|XAND|SUCR|DNTPPA_1|NTP3|HP|NTP1|TransportSeed_h2o|DC6PH|NTP5|GLUN|NO3abc|GLXO1|CD2abc1|SSALy|5DOAN|HDH|LCADi|DAPAL|ACM6PH|MALT|NTD9|FMETDF|CYTDH|NTD7|MOADCST|X00002|ADNUC|AP4AH|DNAS_LPL|GDPTPDP|ARSENBabc|NIabc|G6PDA|APH120|GTPCI|PTRCabc|ALDD2y|ALDD2x|2MAHMP|AASDH1_c|MLTG4|MLTG7|MLTG6|MLTG1|MLTG3|MLTG2|MG2abc|GCALDD|ZNabc|HXAND|METDabc|biomass_LPL60|NTPP3|METSRabc|PPA|MDDCP5ppc|SELNPS|CHLabc|METAT|LIPO3S24_BS|ARGabc|ADPDS_manual|NADN|GMPS2|HMGCOASi|MALTabc|BG_MADG|MDDCP1ppc|GGGABAH|NMNHYD|PROTS_LPL_v60|DCYTD|BG_MBDG|TMN|GDPMNP|AP5AH|NMNDA|CTPS2|MDDCP3ppc|CRNabc|MNabc|MDDCP4ppc|AKP1|AB6PGH|RAFH|S6PG|Cut1|MI1PP|AHMMPS_LPL|AIRC1|CBPS|MOHMT|KDOPS|HISTP|FFSD|ALDD20x_1|ADD|UDCPDP|NADPN|ADA|CS|GLNabc|HYPOE|FBP|ALDD4x|BLUB|PGPP_LPL|SSALx|GP4GH|ASNN|RNAS_LPL|FERRICHabc|NTD8|ASPO1|NMNN|THFAT|CYSTL|TRPAS1|ALDD8|GUAD|SDPDS|APH141|INSH|DADA|FERXAabc|COBALT2abcpppe|NNAM|CPMPS|PIabc|METabc|ECTOINEabc|CYSabc2pppe|ACYP_2|DAAOP|POX|ACODA_1|PGL|CHOLSabc_1|APH180|APH181|ADPRDP|PPS|LACZ|AASS_c|GLUPRT|ALDD1|GPDDA4|GPDDA5|GBBTNabc|GPDDA1|GPDDA2|GPDDA3|MTAN|ABUTD|IPPS|APH160|APH161|NTD6|3AMACHYD|NTD4|NTD5|NTD2|NTD3|TRE6PH|NTD1|ALDD12|ALDD13|ALDD10|ALDD11|ALDD16|ALDD17|ALDD14|ALDD15|CYSTGL_1|ALDD18|ALAALAD|METSabc|NI2abcpppe|ZN2abcpppe|CTBTabc|ALKP|ALLTAMH|PRAMPC|PROLBabc|BG_CELLB|PENCAC|ACP1_FMN|ALDD7|NTPTP1|NTPTP2|DUTPDP}}
+
* MetaNetX (MNX) Equation : MNXR100295
{{#set: produced by=WCOS|3HAD120|3HAD121|CPPPGO|NADHPO|OPMEACPD|SUCBZS|HBUHL1_manual|CYTB_B2|RNTR2|CAT|METSR_S1|MNNH|3HAD140|3HAD141|3HAD100|PHETHPTOX|CSPMDDH|IGPS|3HAD160|3HAD161|OGMEACPD|3HAD180|PKETF|METSR_R2|DHQTi|METSR_R1|FAS120|CYSTS_2|KAS2|RNDR4|METSOXR2|METSOXR1|PYDXS|HHYHL2_manual|FAS140|ICH|RNTR3|RNDR1|RNTR1|FAS100|FOMETRi|KAS17|CYTBD|DHDPS|TransportSeed_h2o|G5SADs|RNTR4|TRPS1|IGPDH|DHNCOAS|DMBZIDS2|METSR_S2|3HAD80|DHAD1|DHAD2|FAS80_L|PLPS|MOCOS|ANS2|PPNDH|SACCD_c|3HAD40|3HAD181|NOX2|RNDR3|RNDR2|3HAD60|IGPDH_1|KAS13|TDPGDH}}
+
* KEGG Reaction : R05578
{{#set: consumed or produced by=GHMT2r|GLXO3r|GLUDxi|ATPS3r|HMGCOAS|3NUCLE1|3NUCLE3|3NUCLE2|GLYDHDA|3NUCLE4|GLUDy|DBRC|IMPC|ExchangeSeed_h2o|FRULYSDG|GLNTAL|DCMPDA|PKL|UAG2EMA|CPSS_LPL2|MCSNAH|23CN2P3|23CN2P2|23CN2P1|23CN2P4|ACONTa|ACONTb|APATi|MTHFC|ENO|IPPMIb|IPPMIa|E4PD|ADPDA|GLYALDDr|SACCD1|SACCD2|HCO3E|BZDH|DHORTS}}
+
* EC Number : 6.1.1
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Glutamyl-tRNA synthetase}}
 +
{{#set: gene associated=EF0043}}
 +
{{#set: in pathway=map01100|map01110|map00860|map01120|map00970}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:22, 21 March 2018

Reaction GLUTRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glutamyl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Glutamate[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 TRNA (Glu)[c] => 1.0 L-Glutamyl-tRNA(Glu)[c] + 1.0 Diphosphate[c] + 1.0 AMP C10H12N5O7P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • Reactome : REACT_R-HSA-379861
  • MetaNetX (MNX) Equation : MNXR100295
  • KEGG Reaction : R05578
  • EC Number : 6.1.1