Difference between revisions of "ICYSDS"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/ser__L ser__L] == * common name: ** L-Serine * Synonym(s): == Reaction(s) known to consume t...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICYSDS ICYSDS] == * direction: ** LEFT-TO-RIGHT * common name: ** ISC Cysteine desulfuration * Syno...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/ser__L ser__L] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ICYSDS ICYSDS] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** L-Serine
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** ISC Cysteine desulfuration
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[TRPS1]]
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* With identifiers:
* [[CYSTS_2]]
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** 1.0 [[iscs]][c] '''+''' 1.0 [[cys__L]][c] '''=>''' 1.0 [[iscssh]][c] '''+''' 1.0 [[ala__L]][c]
* [[SERTRS2]]
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* With common name(s):
* [[SERt4]]
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** 1.0 IscS sulfur acceptor protein[c] '''+''' 1.0 L-Cysteine[c] '''=>''' 1.0 IscS with bound sulfur[c] '''+''' 1.0 L-Alanine[c]
* [[SERTRS]]
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* [[SERD_L]]
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== Genes associated with this reaction  ==
* [[TransportSeed_ser__L]]
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Genes have been associated with this reaction based on different elements listed below.
== Reaction(s) known to produce the compound ==
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* Gene: [[EF2072]]
* [[MOADCST]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[TransportSeed_ser__L]]
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* Gene: [[EF0371]]
* [[SERt4]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[GPDDA3]]
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== Pathways  ==
== Reaction(s) of unknown directionality ==
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== Reconstruction information  ==
* [[ExchangeSeed_ser__L]]
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* Category: [[orthology]]
* [[GHMT2r]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[SERASr]]
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*** Tool: [[pantograph]]
* [[SERAT]]
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* [[LSERDHr]]
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== External links  ==
 
== External links  ==
{{#set: common name=L-Serine}}
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* MetaNetX (MNX) Equation : MNXR100790
{{#set: consumed by=TRPS1|CYSTS_2|SERTRS2|SERt4|SERTRS|SERD_L|TransportSeed_ser__L}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: produced by=MOADCST|TransportSeed_ser__L|SERt4|GPDDA3}}
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{{#set: common name=ISC Cysteine desulfuration}}
{{#set: consumed or produced by=ExchangeSeed_ser__L|GHMT2r|SERASr|SERAT|LSERDHr}}
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{{#set: gene associated=EF2072|EF0371}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:25, 21 March 2018

Reaction ICYSDS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ISC Cysteine desulfuration
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 IscS sulfur acceptor protein[c] + 1.0 L-Cysteine[c] => 1.0 IscS with bound sulfur[c] + 1.0 L-Alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100790