Difference between revisions of "UDPGALM"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PRATPP PRATPP] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribosyl-ATP pyrophosphatas...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UDPGALM UDPGALM] == * direction: ** LEFT-TO-RIGHT * common name: ** UDPgalactopyranose mutase * Syn...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PRATPP PRATPP] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/UDPGALM UDPGALM] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Phosphoribosyl-ATP pyrophosphatase
+
** UDPgalactopyranose mutase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[prbatp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[prbamp]][c]
+
** 1.0 [[udpgal]][c] '''=>''' 1.0 [[udpgalfur]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 1-(5-Phosphoribosyl)-ATP[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 1-(5-Phosphoribosyl)-AMP[c]
+
** 1.0 UDPgalactose[c] '''=>''' 1.0 UDP-D-galacto-1,4-furanose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF2487]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''24''' reactions found over '''80''' reactions in the full pathway
−
* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
+
* [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052]
−
** '''17''' reactions found over '''90''' reactions in the full pathway
+
** '''17''' reactions found over '''67''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
−
** '''83''' reactions found over '''228''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22828 22828]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24132 24132]
−
* EC Number : 3.6.1.31
+
* BioCyc : META:GALPMUT-RXN
−
* MetaNetX (MNX) Equation : MNXR103155
+
* MetaNetX (MNX) Equation : MNXR105058
−
* KEGG Reaction : R04035
+
* KEGG Reaction : R00505
−
* BioCyc : META:HISTPRATPHYD-RXN
+
* EC Number : 5.4.99.9
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Phosphoribosyl-ATP pyrophosphatase}}
+
{{#set: common name=UDPgalactopyranose mutase}}
−
{{#set: in pathway=map01100|map00340|map01110|map01230}}
+
{{#set: gene associated=EF2487}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=map00520|map00052}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:07, 21 March 2018

Reaction UDPGALM

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDPgalactopyranose mutase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 UDPgalactose[c] => 1.0 UDP-D-galacto-1,4-furanose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:GALPMUT-RXN
  • MetaNetX (MNX) Equation : MNXR105058
  • KEGG Reaction : R00505
  • EC Number : 5.4.99.9




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