Difference between revisions of "DAPE"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DAPE DAPE] == * direction: ** REVERSIBLE * common name: ** Diaminopimelate epimerase * Synonym(s):...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DAPE DAPE] == * direction: ** REVERSIBLE * common name: ** Diaminopimelate epimerase * Synonym(s):...") |
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== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[EF0464]] | + | * Gene: [[EF0464]] |
| − | ** [[ | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | ** [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | ** [[ | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
== Pathways == | == Pathways == | ||
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| − | ** ''' | + | ** '''460''' reactions found over '''2349''' reactions in the full pathway |
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| − | ** ''' | + | ** '''179''' reactions found over '''1054''' reactions in the full pathway |
* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] | * [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300] | ||
** '''13''' reactions found over '''34''' reactions in the full pathway | ** '''13''' reactions found over '''34''' reactions in the full pathway | ||
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| − | ** ''' | + | ** '''104''' reactions found over '''715''' reactions in the full pathway |
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | ||
| − | ** ''' | + | ** '''56''' reactions found over '''228''' reactions in the full pathway |
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| − | ** ''' | + | ** '''135''' reactions found over '''694''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| − | ** | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| Line 50: | Line 52: | ||
{{#set: in pathway=map01100|map01110|map00300|map01120|map01230|map01130}} | {{#set: in pathway=map01100|map01110|map00300|map01120|map01230|map01130}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Latest revision as of 15:07, 21 March 2018
Contents
Reaction DAPE
- direction:
- REVERSIBLE
- common name:
- Diaminopimelate epimerase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 LL-2,6-Diaminoheptanedioate[c] <=> 1.0 Meso-2,6-Diaminoheptanedioate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF0464
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map00300: map00300
- 13 reactions found over 34 reactions in the full pathway
- map01120: map01120
- 104 reactions found over 715 reactions in the full pathway
- map01230: map01230
- 56 reactions found over 228 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:DIAMINOPIMEPIM-RXN
- MetaNetX (MNX) Equation : MNXR97143
- KEGG Reaction : R02735
- EC Number : 5.1.1.7
