Difference between revisions of "FUMt2 3"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AIRC3 AIRC3] == * direction: ** REVERSIBLE * common name: ** Phosphoribosylaminoimidazole carboxyla...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FUMt2_3 FUMt2_3] == * direction: ** LEFT-TO-RIGHT * common name: ** Fumarate transport via proton s...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/AIRC3 AIRC3] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/FUMt2_3 FUMt2_3] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Phosphoribosylaminoimidazole carboxylase (mutase rxn)
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** Fumarate transport via proton symport (3 H)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[5aizc]][c] '''<=>''' 1.0 [[5caiz]][c]
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** 1.0 [[fum]][e] '''+''' 3.0 [[h]][e] '''=>''' 1.0 [[fum]][c] '''+''' 3.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] '''<=>''' 1.0 5-phosphoribosyl-5-carboxyaminoimidazole[c]
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** 1.0 Fumarate[e] '''+''' 3.0 H+[e] '''=>''' 1.0 Fumarate[c] '''+''' 3.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1787]]
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* Gene: [[EF1920]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** Source: [[manual-2_reaction_to_add_delete]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''156''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
−
** '''98''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[manual]]
−
** [[pantograph]]:
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** Source: [[manual-2_reaction_to_add_delete]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR99712
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13193 13193]
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* BioCyc : META:TRANS-RXN-299
−
* BioCyc : META:RXN0-743
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{{#set: direction=LEFT-TO-RIGHT}}
−
* MetaNetX (MNX) Equation : MNXR95645
+
{{#set: common name=Fumarate transport via proton symport (3 H)}}
−
* KEGG Reaction : R07405
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{{#set: gene associated=EF1920}}
−
* EC Number : 5.4.99.18
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{{#set: in pathway=}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: reconstruction category=manual}}
−
{{#set: common name=Phosphoribosylaminoimidazole carboxylase (mutase rxn)}}
+
{{#set: reconstruction source=manual-2_reaction_to_add_delete}}
−
{{#set: gene associated=EF1787}}
+
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
−
{{#set: in pathway=map01100|map01130|map01110|map00230}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
+

Latest revision as of 15:32, 21 March 2018

Reaction FUMt2_3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Fumarate transport via proton symport (3 H)
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 fum[e] + 3.0 h[e] => 1.0 fum[c] + 3.0 h[c]
  • With common name(s):
    • 1.0 Fumarate[e] + 3.0 H+[e] => 1.0 Fumarate[c] + 3.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR99712
  • BioCyc : META:TRANS-RXN-299




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