Difference between revisions of "CPPPGO"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DKII DKII] == * direction: ** LEFT-TO-RIGHT * common name: ** 2 dehydro 3 deoxy D gluconate 5 dehyd...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CPPPGO CPPPGO] == * direction: ** LEFT-TO-RIGHT * common name: ** Coproporphyrinogen oxidase (O2 re...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/CPPPGO CPPPGO] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Coproporphyrinogen oxidase (O2 required) |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[cpppg3]][c] '''+''' 1.0 [[o2]][c] '''+''' 2.0 [[h]][c] '''=>''' 2.0 [[co2]][c] '''+''' 1.0 [[pppg9]][c] '''+''' 2.0 [[h2o]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Coproporphyrinogen III[c] '''+''' 1.0 O2 O2[c] '''+''' 2.0 H+[c] '''=>''' 2.0 CO2 CO2[c] '''+''' 1.0 Protoporphyrinogen IX[c] '''+''' 2.0 H2O H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF1305]] |
| − | ** [[ | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| − | + | ||
| − | + | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860] | ||
| + | ** '''4''' reactions found over '''106''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * RHEA: |
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18257 18257] | ||
| + | * BioCyc : META:RXN0-1461 | ||
| + | * MetaNetX (MNX) Equation : MNXR96880 | ||
| + | * KEGG Reaction : R03220 | ||
| + | * EC Number : 1.3.3.3 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Coproporphyrinogen oxidase (O2 required)}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF1305}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=map01100|map01110|map00860}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Latest revision as of 16:34, 21 March 2018
Contents
Reaction CPPPGO
- direction:
- LEFT-TO-RIGHT
- common name:
- Coproporphyrinogen oxidase (O2 required)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Coproporphyrinogen III[c] + 1.0 O2 O2[c] + 2.0 H+[c] => 2.0 CO2 CO2[c] + 1.0 Protoporphyrinogen IX[c] + 2.0 H2O H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF1305
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map00860: map00860
- 4 reactions found over 106 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
External links
- RHEA:
- BioCyc : META:RXN0-1461
- MetaNetX (MNX) Equation : MNXR96880
- KEGG Reaction : R03220
- EC Number : 1.3.3.3
