Difference between revisions of "CITL"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICITt10 ICITt10] == * direction: ** LEFT-TO-RIGHT * common name: ** Isocitrate transport in via Mg...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CITL CITL] == * direction: ** LEFT-TO-RIGHT * common name: ** Citrate lyase * Synonym(s): == React...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICITt10 ICITt10] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CITL CITL] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Isocitrate transport in via Mg complex
+
** Citrate lyase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][e] '''+''' 1.0 [[icit]][e] '''+''' 1.0 [[mg2]][e] '''=>''' 1.0 [[mg2]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[icit]][c]
+
** 1.0 [[cit]][c] '''=>''' 1.0 [[oaa]][c] '''+''' 1.0 [[ac]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[e] '''+''' 1.0 Isocitrate[e] '''+''' 1.0 Magnesium[e] '''=>''' 1.0 Magnesium[c] '''+''' 1.0 H+[c] '''+''' 1.0 Isocitrate[c]
+
** 1.0 Citrate[c] '''=>''' 1.0 Oxaloacetate[c] '''+''' 1.0 Acetate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF3327]]
+
* Gene: [[EF3321]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* Gene: [[EF3320]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* Gene: [[EF3319]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* Gene: [[EF3318]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* Gene: [[EF3315]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
* Gene: [[EF3322]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR100786
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10760 10760]
 +
* BioCyc : META:CITLY-RXN
 +
* MetaNetX (MNX) Equation : MNXR96731
 +
* KEGG Reaction : R00362
 +
* EC Number : 4.1.3.6
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Isocitrate transport in via Mg complex}}
+
{{#set: common name=Citrate lyase}}
−
{{#set: gene associated=EF3327}}
+
{{#set: gene associated=EF3321|EF3320|EF3319|EF3318|EF3315|EF3322}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 16:35, 21 March 2018

Reaction CITL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Citrate lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Citrate[c] => 1.0 Oxaloacetate[c] + 1.0 Acetate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:CITLY-RXN
  • MetaNetX (MNX) Equation : MNXR96731
  • KEGG Reaction : R00362
  • EC Number : 4.1.3.6




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