Difference between revisions of "ICHORS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACGS ACGS] == * direction: ** LEFT-TO-RIGHT * common name: ** N-acetylglutamate synthase * Synonym(...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS ICHORS] == * direction: ** REVERSIBLE * common name: ** Isochorismate synthase * Synonym(s):...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACGS ACGS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICHORS ICHORS] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** N-acetylglutamate synthase
+
** Isochorismate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[glu__L]][c] '''+''' 1.0 [[accoa]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[acglu]][c] '''+''' 1.0 [[coa]][c]
+
** 1.0 [[chor]][c] '''<=>''' 1.0 [[ichor]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Glutamate[c] '''+''' 1.0 Acetyl-CoA[c] '''=>''' 1.0 H+[c] '''+''' 1.0 N-Acetyl-L-glutamate[c] '''+''' 1.0 Coenzyme A[c]
+
** 1.0 Chorismate[c] '''<=>''' 1.0 Isochorismate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF0447]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
+
−
** '''12''' reactions found over '''65''' reactions in the full pathway
+
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
+
−
** '''25''' reactions found over '''80''' reactions in the full pathway
+
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
−
** '''83''' reactions found over '''228''' reactions in the full pathway
+
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00130]]: [http://www.genome.jp/dbget-bin/www_bget?map00130 map00130]
 +
** '''9''' reactions found over '''40''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01053]]: [http://www.genome.jp/dbget-bin/www_bget?map01053 map01053]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 2.3.1.1
 
−
* BioCyc : META:N-ACETYLTRANSFER-RXN
 
−
* MetaNetX (MNX) Equation : MNXR95259
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24292 24292]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18985 18985]
−
* Reactome : REACT_R-BTA-70542
+
* BioCyc : META:ISOCHORSYN-RXN
−
* KEGG Reaction : R00259
+
* MetaNetX (MNX) Equation : MNXR100784
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* KEGG Reaction : R01717
−
{{#set: common name=N-acetylglutamate synthase}}
+
* EC Number : 5.4.4.2
−
{{#set: in pathway=map01100|map00220|map01110|map01210|map01230|map01130}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: common name=Isochorismate synthase}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: gene associated=EF0447}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: in pathway=map01100|map01130|map00130|map01110|map01053}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:37, 21 March 2018

Reaction ICHORS

  • direction:
    • REVERSIBLE
  • common name:
    • Isochorismate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Chorismate[c] <=> 1.0 Isochorismate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ISOCHORSYN-RXN
  • MetaNetX (MNX) Equation : MNXR100784
  • KEGG Reaction : R01717
  • EC Number : 5.4.4.2




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