Difference between revisions of "MCSNAH"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GMPR GMPR] == * direction: ** LEFT-TO-RIGHT * common name: ** GMP reductase * Synonym(s): == React...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MCSNAH MCSNAH] == * direction: ** REVERSIBLE * common name: ** 5-Methylcytosine aminohydrolase * Sy...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GMPR GMPR] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/MCSNAH MCSNAH] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** GMP reductase
+
** 5-Methylcytosine aminohydrolase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nadph]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[gmp]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[imp]][c] '''+''' 1.0 [[nh4]][c]
+
** 1.0 [[5mcsn]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[h2o]][c] '''<=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[thym]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 2.0 H+[c] '''+''' 1.0 GMP C10H12N5O8P[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 IMP C10H11N4O8P[c] '''+''' 1.0 Ammonium[c]
+
** 1.0 5-Methylcytosine[c] '''+''' 1.0 H+[c] '''+''' 1.0 H2O H2O[c] '''<=>''' 1.0 Ammonium[c] '''+''' 1.0 Thymine C5H6N2O2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2429]]
+
* Gene: [[EF2206]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
** '''98''' reactions found over '''298''' reactions in the full pathway
+
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
 +
** '''22''' reactions found over '''149''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17185 17185]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30759 30759]
−
* BioCyc : META:GMP-REDUCT-RXN
+
* BioCyc : META:RXN-14197
−
* MetaNetX (MNX) Equation : MNXR100382
+
* MetaNetX (MNX) Equation : MNXR101425
−
* KEGG Reaction : R01134
+
* KEGG Reaction : R01411
−
* EC Number : 1.7.1.7
+
* EC Number : 3.5.4.1
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=GMP reductase}}
+
{{#set: common name=5-Methylcytosine aminohydrolase}}
−
{{#set: gene associated=EF2429}}
+
{{#set: gene associated=EF2206}}
−
{{#set: in pathway=map00230}}
+
{{#set: in pathway=map00240|map01100|map00330}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:39, 21 March 2018

Reaction MCSNAH

  • direction:
    • REVERSIBLE
  • common name:
    • 5-Methylcytosine aminohydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5-Methylcytosine[c] + 1.0 H+[c] + 1.0 H2O H2O[c] <=> 1.0 Ammonium[c] + 1.0 Thymine C5H6N2O2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN-14197
  • MetaNetX (MNX) Equation : MNXR101425
  • KEGG Reaction : R01411
  • EC Number : 3.5.4.1




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