Difference between revisions of "MDDCP5ppc"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DBRC DBRC] == * direction: ** REVERSIBLE * common name: ** Dimethylbenzimidazole-riboflavin convers...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP5ppc MDDCP5ppc] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/DBRC DBRC] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP5ppc MDDCP5ppc] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
* common name:
+
** Dimethylbenzimidazole-riboflavin conversion
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 3.0 [[o2]][c] '''+''' 1.0 [[nh4]][c] '''+''' 1.0 [[dmbzid]][c] '''+''' 1.0 [[nicrnt]][c] '''+''' 1.0 [[h2o]][c] '''<=>''' 5.0 [[h]][c] '''+''' 1.0 [[ribflv]][c] '''+''' 1.0 [[pi]][c] '''+''' 3.0 [[for]][c]
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** 1.0 [[h2o]][c] '''+''' 1.0 [[murein5p3p]][c] '''=>''' 1.0 [[murein4p3p]][c] '''+''' 1.0 [[ala__D]][c]
 
* With common name(s):
 
* With common name(s):
** 3.0 O2 O2[c] '''+''' 1.0 Ammonium[c] '''+''' 1.0 5,6-Dimethylbenzimidazole[c] '''+''' 1.0 Nicotinate D-ribonucleotide[c] '''+''' 1.0 H2O H2O[c] '''<=>''' 5.0 H+[c] '''+''' 1.0 Riboflavin C17H20N4O6[c] '''+''' 1.0 Phosphate[c] '''+''' 3.0 Formate[c]
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** 1.0 H2O H2O[c] '''+''' 1.0 Two linked disacharide pentapeptide and tripeptide murein units (uncrosslinked, middle of chain)[c] '''=>''' 1.0 Two linked disacharide tetrapeptide and tripeptide murein units (uncrosslinked, middle of chain)[c] '''+''' 1.0 D-Alanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF3129]]
 +
** Source: [[manual-1_new_rxn_for_biomass]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
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* Category: [[manual]]
** [[meneco]]:
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** Source: [[manual-1_new_rxn_for_biomass]]
*** [[added for gapfilling]]
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*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR97179
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: direction=REVERSIBLE}}
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{{#set: gene associated=EF3129}}
{{#set: common name=Dimethylbenzimidazole-riboflavin conversion}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction source=manual-1_new_rxn_for_biomass}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}

Latest revision as of 15:40, 21 March 2018

Reaction MDDCP5ppc

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Two linked disacharide pentapeptide and tripeptide murein units (uncrosslinked, middle of chain)[c] => 1.0 Two linked disacharide tetrapeptide and tripeptide murein units (uncrosslinked, middle of chain)[c] + 1.0 D-Alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links