Difference between revisions of "MDDCP4ppc"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052] == * common_name: ** Galactose metabolism * Synonym(s): == Reaction(s) found == *...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP4ppc MDDCP4ppc] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP4ppc MDDCP4ppc] ==
* common_name:
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* direction:
** Galactose metabolism
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** LEFT-TO-RIGHT
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
* '''17''' reaction(s) found
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* With identifiers:
** [[GALT]]
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** 1.0 [[murein5p4p]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[murein4p4p]][c] '''+''' 1.0 [[ala__D]][c]
** [[EDA]]
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* With common name(s):
** [[SUCR]]
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** 1.0 Two linked disacharide pentapeptide and tetrapeptide murein units (uncrosslinked, middle of chain)[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Two linked disacharide tetrapeptide murein units (uncrosslinked, middle of chain)[c] '''+''' 1.0 D-Alanine[c]
** [[RAFH]]
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** [[GALKr]]
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== Genes associated with this reaction  ==
** [[PFK]]
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Genes have been associated with this reaction based on different elements listed below.
** [[UDPG4E]]
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* Gene: [[EF3129]]
** [[FFSD]]
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** Source: [[manual-1_new_rxn_for_biomass]]
** [[DDPGALA]]
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== Pathways  ==
** [[GALUi]]
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== Reconstruction information  ==
** [[UDPGALM]]
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* Category: [[manual]]
** [[HEX1]]
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** Source: [[manual-1_new_rxn_for_biomass]]
** [[LACZ]]
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*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
** [[PFK_2]]
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** [[MLTG1]]
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** [[PFK_3]]
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** [[AGDC]]
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== Reaction(s) not found ==
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* '''50''' reaction(s) not found
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** [http://bigg.ucsd.edu/universal/reactions/STACHGALACT STACHGALACT]
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** [http://bigg.ucsd.edu/universal/reactions/BFFS BFFS]
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** [http://bigg.ucsd.edu/universal/reactions/RAFGH RAFGH]
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** [http://bigg.ucsd.edu/universal/reactions/LACZpp LACZpp]
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** [http://bigg.ucsd.edu/universal/reactions/GALOR GALOR]
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** [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
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** [http://bigg.ucsd.edu/universal/reactions/EMGH EMGH]
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** [http://bigg.ucsd.edu/universal/reactions/ALCD22_L ALCD22_L]
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** [http://bigg.ucsd.edu/universal/reactions/RGH RGH]
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** [http://bigg.ucsd.edu/universal/reactions/LCGH LCGH]
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** [http://bigg.ucsd.edu/universal/reactions/SBTRh SBTRh]
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** [http://bigg.ucsd.edu/universal/reactions/MLGH MLGH]
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** [http://bigg.ucsd.edu/universal/reactions/DDGALK DDGALK]
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** [http://bigg.ucsd.edu/universal/reactions/GalMr GalMr]
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** [http://bigg.ucsd.edu/universal/reactions/GALO GALO]
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** [http://bigg.ucsd.edu/universal/reactions/GRGT GRGT]
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** [http://bigg.ucsd.edu/universal/reactions/MLTG1e MLTG1e]
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** [http://bigg.ucsd.edu/universal/reactions/G6PPer G6PPer]
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** [http://bigg.ucsd.edu/universal/reactions/SUCRe SUCRe]
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** [http://bigg.ucsd.edu/universal/reactions/GGLGH GGLGH]
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** [http://bigg.ucsd.edu/universal/reactions/GLUKA GLUKA]
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** [http://bigg.ucsd.edu/universal/reactions/SYGH SYGH]
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** [http://bigg.ucsd.edu/universal/reactions/LACZe LACZe]
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** [http://bigg.ucsd.edu/universal/reactions/TGBPA TGBPA]
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** [http://bigg.ucsd.edu/universal/reactions/UGLT UGLT]
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** [http://bigg.ucsd.edu/universal/reactions/GALS3 GALS3]
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** [http://bigg.ucsd.edu/universal/reactions/GALM2 GALM2]
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** [http://bigg.ucsd.edu/universal/reactions/IAGT IAGT]
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** [http://bigg.ucsd.edu/universal/reactions/UGALGTg UGALGTg]
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** [http://bigg.ucsd.edu/universal/reactions/AGMIS AGMIS]
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** [http://bigg.ucsd.edu/universal/reactions/MLTG1ly MLTG1ly]
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** [http://bigg.ucsd.edu/universal/reactions/OAGMIG OAGMIG]
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** [http://bigg.ucsd.edu/universal/reactions/MTGH MTGH]
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** [http://bigg.ucsd.edu/universal/reactions/GALCTND GALCTND]
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** [http://bigg.ucsd.edu/universal/reactions/RAFHpp RAFHpp]
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** [http://bigg.ucsd.edu/universal/reactions/LACZly LACZly]
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** [http://bigg.ucsd.edu/universal/reactions/GLNLASEer GLNLASEer]
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** [http://bigg.ucsd.edu/universal/reactions/PGCM PGCM]
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** [http://bigg.ucsd.edu/universal/reactions/MELTGH MELTGH]
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** [http://bigg.ucsd.edu/universal/reactions/GLTPD GLTPD]
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** [http://bigg.ucsd.edu/universal/reactions/EPMGH EPMGH]
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** [http://bigg.ucsd.edu/universal/reactions/GALKh GALKh]
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** [http://bigg.ucsd.edu/universal/reactions/GALM2pp GALM2pp]
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** [http://bigg.ucsd.edu/universal/reactions/ARABR ARABR]
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** [http://bigg.ucsd.edu/universal/reactions/GGGH GGGH]
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** [http://bigg.ucsd.edu/universal/reactions/PGMTh PGMTh]
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** [http://bigg.ucsd.edu/universal/reactions/GLUKAh GLUKAh]
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** [http://bigg.ucsd.edu/universal/reactions/GALIGH GALIGH]
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** [http://bigg.ucsd.edu/universal/reactions/MGHB MGHB]
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** [http://bigg.ucsd.edu/universal/reactions/G6PP G6PP]
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== External links  ==
 
== External links  ==
{{#set: common_name=Galactose metabolism}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: reaction found=17}}
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{{#set: gene associated=EF3129}}
{{#set: reaction not found=50}}
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{{#set: in pathway=}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=manual-1_new_rxn_for_biomass}}
 +
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}

Latest revision as of 15:08, 21 March 2018

Reaction MDDCP4ppc

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Two linked disacharide pentapeptide and tetrapeptide murein units (uncrosslinked, middle of chain)[c] + 1.0 H2O H2O[c] => 1.0 Two linked disacharide tetrapeptide murein units (uncrosslinked, middle of chain)[c] + 1.0 D-Alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links