Difference between revisions of "SPMDOX"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADMDC ADMDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosylmethionine decarboxylase *...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDOX SPMDOX] == * direction: ** LEFT-TO-RIGHT * common name: ** Spermidine:(acceptor) oxidoreduct...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ADMDC ADMDC] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/SPMDOX SPMDOX] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Adenosylmethionine decarboxylase
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** Spermidine:(acceptor) oxidoreductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[amet]][c] '''=>''' 1.0 [[ametam]][c] '''+''' 1.0 [[co2]][c]
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** 1.0 [[o2]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[spmd]][c] '''=>''' 1.0 [[4abutn]][c] '''+''' 1.0 [[h2o2]][c] '''+''' 1.0 [[13dampp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 S-Adenosyl-L-methionine[c] '''=>''' 1.0 S-Adenosylmethioninamine[c] '''+''' 1.0 CO2 CO2[c]
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** 1.0 O2 O2[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Spermidine[c] '''=>''' 1.0 4-Aminobutanal[c] '''+''' 1.0 Hydrogen peroxide[c] '''+''' 1.0 1 3 Diaminopropane C3H12N2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 
** '''25''' reactions found over '''135''' reactions in the full pathway
 
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
 
** '''24''' reactions found over '''149''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
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* Category: [[gap-filling]]
** [[meneco]]:
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** [[added for gapfilling]]
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*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
* RHEA:
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* MetaNetX (MNX) Equation : MNXR104481
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
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* EC Number : 4.1.1.50
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* MetaNetX (MNX) Equation : MNXR95455
+
* KEGG Reaction : R00178
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* BioCyc : META:SAMDECARB-RXN
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Adenosylmethionine decarboxylase}}
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{{#set: common name=Spermidine:(acceptor) oxidoreductase}}
{{#set: in pathway=map01100|map00270|map00330}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=gap-filling}}
 
{{#set: reconstruction category=gap-filling}}
 +
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
 
{{#set: reconstruction tool=meneco}}
 
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 15:44, 21 March 2018

Reaction SPMDOX

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Spermidine:(acceptor) oxidoreductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 O2 O2[c] + 1.0 H2O H2O[c] + 1.0 Spermidine[c] => 1.0 4-Aminobutanal[c] + 1.0 Hydrogen peroxide[c] + 1.0 1 3 Diaminopropane C3H12N2[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR104481