Difference between revisions of "SERD D"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_gly TransportSeed_gly] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Fo...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SERD_D SERD_D] == * direction: ** LEFT-TO-RIGHT * common name: ** D-serine deaminase * Synonym(s):...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/SERD_D SERD_D] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** D-serine deaminase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[ser__D]][c] '''=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[nh4]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 D-Serine[c] '''=>''' 1.0 Pyruvate[c] '''+''' 1.0 Ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[EF2579]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260] | ||
| + | ** '''23''' reactions found over '''133''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13977 13977] | ||
| + | * BioCyc : META:DSERDEAM-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR104338 | ||
| + | * KEGG Reaction : R00221 | ||
| + | * EC Number : 4.3.1.18 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: in pathway=}} | + | {{#set: common name=D-serine deaminase}} |
| − | {{#set: reconstruction category= | + | {{#set: gene associated=EF2579}} |
| − | {{#set: reconstruction source= | + | {{#set: in pathway=map00260}} |
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:45, 21 March 2018
Contents
Reaction SERD_D
- direction:
- LEFT-TO-RIGHT
- common name:
- D-serine deaminase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 D-Serine[c] => 1.0 Pyruvate[c] + 1.0 Ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF2579
- Source: orthology-l_plantarum_wcfs1
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
External links
- RHEA:
- BioCyc : META:DSERDEAM-RXN
- MetaNetX (MNX) Equation : MNXR104338
- KEGG Reaction : R00221
- EC Number : 4.3.1.18
