Difference between revisions of "SPODM"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URAt2 URAt2] == * direction: ** LEFT-TO-RIGHT * common name: ** Uracil transport in via proton symp...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPODM SPODM] == * direction: ** LEFT-TO-RIGHT * common name: ** Superoxide dismutase * Synonym(s):...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/URAt2 URAt2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/SPODM SPODM] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Uracil transport in via proton symport
+
** Superoxide dismutase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][e] '''+''' 1.0 [[ura]][e] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[ura]][c]
+
** 2.0 [[h]][c] '''+''' 2.0 [[o2s]][c] '''=>''' 1.0 [[h2o2]][c] '''+''' 1.0 [[o2]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[e] '''+''' 1.0 Uracil[e] '''=>''' 1.0 H+[c] '''+''' 1.0 Uracil[c]
+
** 2.0 H+[c] '''+''' 2.0 Superoxide anion[c] '''=>''' 1.0 Hydrogen peroxide[c] '''+''' 1.0 O2 O2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF3000]]
+
* Gene: [[EF0463]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[EF1720]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** [[l_plantarum_wcfs1]]
+
*** Tool: [[pantograph]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29239 29239]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20696 20696]
* MetaNetX (MNX) Equation : MNXR105148
+
* BioCyc : META:SUPEROX-DISMUT-RXN
* BioCyc : META:TRANS-RXN-132
+
* MetaNetX (MNX) Equation : MNXR104498
 +
* KEGG Reaction : R00275
 +
* EC Number : 1.15.1.1
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Uracil transport in via proton symport}}
+
{{#set: common name=Superoxide dismutase}}
{{#set: gene associated=EF3000|EF1720}}
+
{{#set: gene associated=EF0463}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:08, 21 March 2018

Reaction SPODM

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Superoxide dismutase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2.0 H+[c] + 2.0 Superoxide anion[c] => 1.0 Hydrogen peroxide[c] + 1.0 O2 O2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:SUPEROX-DISMUT-RXN
  • MetaNetX (MNX) Equation : MNXR104498
  • KEGG Reaction : R00275
  • EC Number : 1.15.1.1