Difference between revisions of "NTD10"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220] == * common_name: ** Arginine biosynthesis * Synonym(s): == Reaction(s) found == *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD10 NTD10] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (XMP) * Synonym(s):...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD10 NTD10] ==
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* common_name:
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* direction:
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** Arginine biosynthesis
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** LEFT-TO-RIGHT
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* common name:
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** 5'-nucleotidase (XMP)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''9''' reaction(s) found
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* With identifiers:
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** [[ACGS]]
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** 1.0 [[xmp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[xtsn]][c]
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** [[GLUDy]]
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* With common name(s):
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** [[OCBT]]
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** 1.0 Xanthosine 5'-phosphate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Xanthosine[c]
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** [[GLUDxi]]
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** [[ALATA_L]]
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== Genes associated with this reaction  ==
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** [[ASNN]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[GLNS]]
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* Gene: [[EF0062]]
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** [[ASPTA]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [[CBMKr]]
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== Pathways  ==
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== Reaction(s) not found ==
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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* '''56''' reaction(s) not found
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** '''82''' reactions found over '''244''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/AGPR AGPR]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** [http://bigg.ucsd.edu/universal/reactions/UREA UREA]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/ARGDI ARGDI]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** [http://bigg.ucsd.edu/universal/reactions/LCYSTAT LCYSTAT]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/ASNNm ASNNm]
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* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
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** [http://bigg.ucsd.edu/universal/reactions/URCB URCB]
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** '''97''' reactions found over '''298''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/ORNTACim ORNTACim]
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* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
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** [http://bigg.ucsd.edu/universal/reactions/OCBTm OCBTm]
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** '''19''' reactions found over '''97''' reactions in the full pathway
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** [http://bigg.ucsd.edu/universal/reactions/NOS2 NOS2]
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== Reconstruction information  ==
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** [http://bigg.ucsd.edu/universal/reactions/ARGN ARGN]
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* Category: [[orthology]]
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** [http://bigg.ucsd.edu/universal/reactions/ASPSE ASPSE]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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** [http://bigg.ucsd.edu/universal/reactions/ACGK ACGK]
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*** Tool: [[pantograph]]
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** [http://bigg.ucsd.edu/universal/reactions/CPS CPS]
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** [http://bigg.ucsd.edu/universal/reactions/ALATA_Lm ALATA_Lm]
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** [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
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** [http://bigg.ucsd.edu/universal/reactions/ARGSL ARGSL]
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** [http://bigg.ucsd.edu/universal/reactions/ACOTA ACOTA]
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** [http://bigg.ucsd.edu/universal/reactions/GLUDym GLUDym]
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** [http://bigg.ucsd.edu/universal/reactions/GDH_nadp GDH_nadp]
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** [http://bigg.ucsd.edu/universal/reactions/ACGKm ACGKm]
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** [http://bigg.ucsd.edu/universal/reactions/OCTm OCTm]
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** [http://bigg.ucsd.edu/universal/reactions/3SALATAi 3SALATAi]
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** [http://bigg.ucsd.edu/universal/reactions/OCTh OCTh]
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** [http://bigg.ucsd.edu/universal/reactions/GLNSP2 GLNSP2]
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** [http://bigg.ucsd.edu/universal/reactions/GLNSP3 GLNSP3]
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** [http://bigg.ucsd.edu/universal/reactions/ARGSS ARGSS]
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** [http://bigg.ucsd.edu/universal/reactions/ASNNe ASNNe]
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** [http://bigg.ucsd.edu/universal/reactions/ARGDr ARGDr]
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** [http://bigg.ucsd.edu/universal/reactions/OCT OCT]
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** [http://bigg.ucsd.edu/universal/reactions/NOS1 NOS1]
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** [http://bigg.ucsd.edu/universal/reactions/URCBm URCBm]
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** [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
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** [http://bigg.ucsd.edu/universal/reactions/3SALATAim 3SALATAim]
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** [http://bigg.ucsd.edu/universal/reactions/UREASE UREASE]
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** [http://bigg.ucsd.edu/universal/reactions/ALPHm ALPHm]
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** [http://bigg.ucsd.edu/universal/reactions/GDH1 GDH1]
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** [http://bigg.ucsd.edu/universal/reactions/ALPHNH ALPHNH]
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** [http://bigg.ucsd.edu/universal/reactions/ARGSS_1 ARGSS_1]
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** [http://bigg.ucsd.edu/universal/reactions/AGPRim AGPRim]
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** [http://bigg.ucsd.edu/universal/reactions/ARGNm ARGNm]
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** [http://bigg.ucsd.edu/universal/reactions/NOS2_1 NOS2_1]
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** [http://bigg.ucsd.edu/universal/reactions/LCYSTATm LCYSTATm]
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** [http://bigg.ucsd.edu/universal/reactions/GLNSP1 GLNSP1]
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** [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
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** [http://bigg.ucsd.edu/universal/reactions/ACODA ACODA]
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** [http://bigg.ucsd.edu/universal/reactions/ACOTAim ACOTAim]
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** [http://bigg.ucsd.edu/universal/reactions/AATC AATC]
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** [http://bigg.ucsd.edu/universal/reactions/ASNNpp ASNNpp]
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** [http://bigg.ucsd.edu/universal/reactions/AATG AATG]
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** [http://bigg.ucsd.edu/universal/reactions/ORNTAC ORNTAC]
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** [http://bigg.ucsd.edu/universal/reactions/GDH GDH]
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** [http://bigg.ucsd.edu/universal/reactions/GALm GALm]
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** [http://bigg.ucsd.edu/universal/reactions/ACGSm ACGSm]
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** [http://bigg.ucsd.edu/universal/reactions/AATGm AATGm]
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** [http://bigg.ucsd.edu/universal/reactions/GALh GALh]
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** [http://bigg.ucsd.edu/universal/reactions/NOS NOS]
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== External links  ==
 
== External links  ==
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{{#set: common_name=Arginine biosynthesis}}
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* RHEA:
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{{#set: reaction found=9}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28530 28530]
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{{#set: reaction not found=56}}
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* BioCyc : META:XMPXAN-RXN
 +
* MetaNetX (MNX) Equation : MNXR102029
 +
* KEGG Reaction : R02719
 +
* EC Number : 3.1.3.5
 +
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=5'-nucleotidase (XMP)}}
 +
{{#set: gene associated=EF0062}}
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{{#set: in pathway=map00240|map01100|map01110|map00230|map00760}}
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{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:08, 21 March 2018

Reaction NTD10

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase (XMP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Xanthosine 5'-phosphate[c] + 1.0 H2O H2O[c] => 1.0 Phosphate[c] + 1.0 Xanthosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:XMPXAN-RXN
  • MetaNetX (MNX) Equation : MNXR102029
  • KEGG Reaction : R02719
  • EC Number : 3.1.3.5




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