Difference between revisions of "GLYBabc"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_pydx5p TransportSeed_pydx5p] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == React...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYBabc GLYBabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycine betaine transport via A...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYBabc GLYBabc] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** Glycine betaine transport via ABC system | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[atp]][c] '''+''' 1.0 [[glyb]][e] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[glyb]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Glycine betaine[e] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Glycine betaine[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[EF0675]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | * Gene: [[EF0864]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | * Gene: [[EF0865]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | * Gene: [[EF0862]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | * Gene: [[EF0674]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | * Gene: [[EF0863]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32783#1 32783#1] | ||
| + | * MetaNetX (MNX) Equation : MNXR100314 | ||
| + | * BioCyc : META:TRANS-RXN-283 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Glycine betaine transport via ABC system}} | ||
| + | {{#set: gene associated=EF0675|EF0864|EF0865|EF0862|EF0674|EF0863}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} |
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:17, 21 March 2018
Contents
Reaction GLYBabc
- direction:
- LEFT-TO-RIGHT
- common name:
- Glycine betaine transport via ABC system
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 ATP C10H12N5O13P3[c] + 1.0 Glycine betaine[e] + 1.0 H2O H2O[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 Glycine betaine[c] + 1.0 Phosphate[c] + 1.0 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF0675
- Source: orthology-l_plantarum_wcfs1
- Gene: EF0864
- Gene: EF0865
- Gene: EF0862
- Gene: EF0674
- Source: orthology-l_plantarum_wcfs1
- Gene: EF0863
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
External links
- RHEA:
- MetaNetX (MNX) Equation : MNXR100314
- BioCyc : META:TRANS-RXN-283
