Difference between revisions of "UAMAGS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SELNPS SELNPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Selenophosphate synthase * Synony...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAGS UAMAGS] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP-N-acetylmuramoyl-L-alanyl-D-g...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/SELNPS SELNPS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/UAMAGS UAMAGS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Selenophosphate synthase
+
** UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[seln]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[selnp]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[glu__D]][c] '''+''' 1.0 [[uama]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[uamag]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Selenide[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Selenophosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 D-Glutamate[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanine[c] '''=>''' 1.0 H+[c] '''+''' 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2567]]
+
* Gene: [[EF0993]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00450]]: [http://www.genome.jp/dbget-bin/www_bget?map00450 map00450]
+
* [[map00471]]: [http://www.genome.jp/dbget-bin/www_bget?map00471 map00471]
−
** '''6''' reactions found over '''35''' reactions in the full pathway
+
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
 +
** '''10''' reactions found over '''27''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16429 16429]
−
* BioCyc : META:2.7.9.3-RXN
+
* BioCyc : META:UDP-NACMURALA-GLU-LIG-RXN
−
* MetaNetX (MNX) Equation : MNXR104322
+
* MetaNetX (MNX) Equation : MNXR105038
−
* KEGG Reaction : R03595
+
* KEGG Reaction : R02783
−
* EC Number : 2.7.9.3
+
* EC Number : 6.3.2.9
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Selenophosphate synthase}}
+
{{#set: common name=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase}}
−
{{#set: gene associated=EF2567}}
+
{{#set: gene associated=EF0993}}
−
{{#set: in pathway=map01100|map00450}}
+
{{#set: in pathway=map01100|map00471|map00550}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
 

Latest revision as of 15:18, 21 March 2018

Reaction UAMAGS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 D-Glutamate[c] + 1.0 UDP-N-acetylmuramoyl-L-alanine[c] => 1.0 H+[c] + 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate[c] + 1.0 Phosphate[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:UDP-NACMURALA-GLU-LIG-RXN
  • MetaNetX (MNX) Equation : MNXR105038
  • KEGG Reaction : R02783
  • EC Number : 6.3.2.9




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