Difference between revisions of "Ichor"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD5 NTD5] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (dTMP) * Synonym(s):...")
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/ichor ichor] == * common name: ** Isochorismate * Synonym(s): == Reaction(s) known to consum...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD5 NTD5] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/ichor ichor] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** 5'-nucleotidase (dTMP)
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** Isochorismate
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[SALSYN]]
** 1.0 [[h2o]][c] '''+''' 1.0 [[dtmp]][c] '''=>''' 1.0 [[thymd]][c] '''+''' 1.0 [[pi]][c]
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* [[SEPHCHCS]]
* With common name(s):
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== Reaction(s) known to produce the compound ==
** 1.0 H2O H2O[c] '''+''' 1.0 DTMP C10H13N2O8P[c] '''=>''' 1.0 Thymidine C10H14N2O5[c] '''+''' 1.0 Phosphate[c]
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* [[ICHORS_copy2]]
 
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== Reaction(s) of unknown directionality ==
== Genes associated with this reaction  ==
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* [[ICHORS]]
Genes have been associated with this reaction based on different elements listed below.
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* [[2S6HCCi]]
* [[EF0822]]
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* [[ICHORS_copy1]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[EF0062]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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** '''82''' reactions found over '''244''' reactions in the full pathway
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=Isochorismate}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11080 11080]
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{{#set: consumed by=SALSYN|SEPHCHCS}}
* BioCyc : META:THYMIDYLATE-5-PHOSPHATASE-RXN
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{{#set: produced by=ICHORS_copy2}}
* MetaNetX (MNX) Equation : MNXR102035
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{{#set: reversible reaction associated=ICHORS|2S6HCCi|ICHORS_copy1}}
* KEGG Reaction : R01569
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* EC Number : 3.1.3.35
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=5'-nucleotidase (dTMP)}}
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{{#set: gene associated=EF0822|EF0062}}
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{{#set: in pathway=map00240|map01100}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}}
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Latest revision as of 15:19, 21 March 2018

Metabolite ichor

  • common name:
    • Isochorismate
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links