Difference between revisions of "GND"
From metabolic_network
(Created page with "Category:Gene == Gene EF0902 == * Synonym(s): == Reactions associated == * PMEVK ** pantograph-l_plantarum_wcfs1 == Pathways associated == * map01100 * ...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GND GND] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphogluconate dehydrogenase * Synony...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/GND GND] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** Phosphogluconate dehydrogenase | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** [[ | + | ** 1.0 [[nadp]][c] '''+''' 1.0 [[6pgc]][c] '''=>''' 1.0 [[nadph]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[ru5p__D]][c] |
| − | == Pathways | + | * With common name(s): |
| − | * [[map01100]] | + | ** 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 6-Phospho-D-gluconate[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 D-Ribulose 5-phosphate[c] |
| − | * [[ | + | |
| − | * [[map01110]] | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| + | * Gene: [[EF3142]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | * Gene: [[EF1049]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480] | ||
| + | ** '''10''' reactions found over '''39''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''179''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''104''' reactions found over '''715''' reactions in the full pathway | ||
| + | * [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200] | ||
| + | ** '''45''' reactions found over '''220''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''135''' reactions found over '''694''' reactions in the full pathway | ||
| + | * [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030] | ||
| + | ** '''26''' reactions found over '''69''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * EC Number : 1.1.1.351 |
| − | {{#set: pathway | + | * BioCyc : META:RXN-9952 |
| + | * MetaNetX (MNX) Equation : MNXR100389 | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116] | ||
| + | * Reactome : REACT_R-ATH-71299 | ||
| + | * KEGG Reaction : R01528 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Phosphogluconate dehydrogenase}} | ||
| + | {{#set: gene associated=EF3142|EF1049}} | ||
| + | {{#set: in pathway=map01100|map00480|map01110|map01120|map01200|map01130|map00030}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:20, 21 March 2018
Contents
Reaction GND
- direction:
- LEFT-TO-RIGHT
- common name:
- Phosphogluconate dehydrogenase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 6-Phospho-D-gluconate[c] => 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 CO2 CO2[c] + 1.0 D-Ribulose 5-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF3142
- Source: orthology-l_plantarum_wcfs1
- Gene: EF1049
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00480: map00480
- 10 reactions found over 39 reactions in the full pathway
- map01110: map01110
- 179 reactions found over 1054 reactions in the full pathway
- map01120: map01120
- 104 reactions found over 715 reactions in the full pathway
- map01200: map01200
- 45 reactions found over 220 reactions in the full pathway
- map01130: map01130
- 135 reactions found over 694 reactions in the full pathway
- map00030: map00030
- 26 reactions found over 69 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- EC Number : 1.1.1.351
- BioCyc : META:RXN-9952
- MetaNetX (MNX) Equation : MNXR100389
- RHEA:
- Reactome : REACT_R-ATH-71299
- KEGG Reaction : R01528
