Difference between revisions of "CYTBD"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/G3PD2 G3PD2] == * direction: ** REVERSIBLE * common name: ** Glycerol-3-phosphate dehydrogenase (NA...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTBD CYTBD] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytochrome oxidase bd (ubiquinol-8:...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/G3PD2 G3PD2] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTBD CYTBD] ==
 
* direction:
 
* direction:
** REVERSIBLE
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Glycerol-3-phosphate dehydrogenase (NADP)
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** Cytochrome oxidase bd (ubiquinol-8: 2 protons)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[nadp]][c] '''+''' 1.0 [[glyc3p]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[dhap]][c] '''+''' 1.0 [[nadph]][c]
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** 0.5 [[o2]][c] '''+''' 1.0 [[q8h2]][c] '''+''' 2.0 [[h]][c] '''=>''' 1.0 [[q8]][c] '''+''' 1.0 [[h2o]][c] '''+''' 2.0 [[h]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Glycerol 3-phosphate[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 Dihydroxyacetone phosphate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c]
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** 0.5 O2 O2[c] '''+''' 1.0 Ubiquinol-8[c] '''+''' 2.0 H+[c] '''=>''' 1.0 Ubiquinone-8[c] '''+''' 1.0 H2O H2O[c] '''+''' 2.0 H+[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1747]]
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* Gene: [[EF2061]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** Source: [[manual-2_reaction_to_add_delete]]
 +
* Gene: [[EF2060]]
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** Source: [[manual-2_reaction_to_add_delete]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
 
** '''19''' reactions found over '''134''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-2_reaction_to_add_delete]]
*** [[e_coli_sstr_k12_substr_mg1655]]
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*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
 
== External links  ==
 
== External links  ==
* RHEA:
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* MetaNetX (MNX) Equation : MNXR97031
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11096 11096]
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{{#set: direction=LEFT-TO-RIGHT}}
* MetaNetX (MNX) Equation : MNXR99877
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{{#set: common name=Cytochrome oxidase bd (ubiquinol-8: 2 protons)}}
* KEGG Reaction : R00844
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{{#set: gene associated=EF2061|EF2060}}
* EC Number : 1.1.1.94
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{{#set: in pathway=}}
{{#set: direction=REVERSIBLE}}
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{{#set: reconstruction category=manual}}
{{#set: common name=Glycerol-3-phosphate dehydrogenase (NADP)}}
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{{#set: reconstruction source=manual-2_reaction_to_add_delete}}
{{#set: gene associated=EF1747}}
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{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
{{#set: in pathway=map00564|map01110}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}
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Latest revision as of 15:29, 21 March 2018

Reaction CYTBD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cytochrome oxidase bd (ubiquinol-8: 2 protons)
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 0.5 o2[c] + 1.0 q8h2[c] + 2.0 h[c] => 1.0 q8[c] + 1.0 h2o[c] + 2.0 h[e]
  • With common name(s):
    • 0.5 O2 O2[c] + 1.0 Ubiquinol-8[c] + 2.0 H+[c] => 1.0 Ubiquinone-8[c] + 1.0 H2O H2O[c] + 2.0 H+[e]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR97031