Difference between revisions of "AIRC2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCTO1 GLYCTO1] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate oxidase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AIRC2 AIRC2] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribosylaminoimidazole carbox...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCTO1 GLYCTO1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/AIRC2 AIRC2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Glycolate oxidase
+
** Phosphoribosylaminoimidazole carboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[o2]][c] '''+''' 1.0 [[glyclt]][c] '''=>''' 1.0 [[h2o2]][c] '''+''' 1.0 [[glx]][c]
+
** 1.0 [[hco3]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[air]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[5caiz]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 O2 O2[c] '''+''' 1.0 Glycolate C2H3O3[c] '''=>''' 1.0 Hydrogen peroxide[c] '''+''' 1.0 Glyoxylate[c]
+
** 1.0 Bicarbonate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 5-phosphoribosyl-5-carboxyaminoimidazole[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF1786]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* Gene: [[EF2362]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 
−
** '''21''' reactions found over '''129''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''104''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''45''' reactions found over '''220''' reactions in the full pathway
 
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''135''' reactions found over '''694''' reactions in the full pathway
 
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.1.3.15
 
−
* BioCyc : META:RXN-969
 
−
* MetaNetX (MNX) Equation : MNXR100338
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25311 25311]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19317 19317]
−
* Reactome : REACT_R-ATH-389842
+
* MetaNetX (MNX) Equation : MNXR95644
−
* KEGG Reaction : R00475
+
* EC Number : 6.3.4.18
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glycolate oxidase}}
+
{{#set: common name=Phosphoribosylaminoimidazole carboxylase}}
−
{{#set: in pathway=map01100|map00630|map01110|map01120|map01200|map01130}}
+
{{#set: gene associated=EF1786|EF2362}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=map01100|map01130|map01110|map00230}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:30, 21 March 2018

Reaction AIRC2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphoribosylaminoimidazole carboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Bicarbonate[c] + 1.0 ATP C10H12N5O13P3[c] + 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 5-phosphoribosyl-5-carboxyaminoimidazole[c] + 1.0 Phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR95644
  • EC Number : 6.3.4.18




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