Difference between revisions of "RPE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pmtcoa pmtcoa] == * common name: ** Palmitoyl-CoA (n-C16:0CoA) * Synonym(s): == Reaction(s)...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RPE RPE] == * direction: ** REVERSIBLE * common name: ** Ribulose 5-phosphate 3-epimerase * Synonym...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/pmtcoa pmtcoa] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/RPE RPE] ==
 +
* direction:
 +
** REVERSIBLE
 
* common name:
 
* common name:
−
** Palmitoyl-CoA (n-C16:0CoA)
+
** Ribulose 5-phosphate 3-epimerase
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1.0 [[ru5p__D]][c] '''<=>''' 1.0 [[xu5p__D]][c]
−
* [[AGPATr_BS]]
+
* With common name(s):
 +
** 1.0 D-Ribulose 5-phosphate[c] '''<=>''' 1.0 D-Xylulose 5-phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF3118]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
 +
** '''15''' reactions found over '''54''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''45''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 +
** '''16''' reactions found over '''71''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 +
** '''26''' reactions found over '''69''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=Palmitoyl-CoA (n-C16:0CoA)}}
+
* EC Number : 5.1.3.1
−
{{#set: consumed or produced by=AGPATr_BS}}
+
* BioCyc : META:RIBULP3EPIM-RXN
 +
* MetaNetX (MNX) Equation : MNXR104083
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13677 13677]
 +
* Reactome : REACT_R-ATH-199803
 +
* KEGG Reaction : R01529
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Ribulose 5-phosphate 3-epimerase}}
 +
{{#set: gene associated=EF3118}}
 +
{{#set: in pathway=map01100|map01110|map01120|map00040|map01200|map01230|map00710|map01130|map00030}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:31, 21 March 2018

Reaction RPE

  • direction:
    • REVERSIBLE
  • common name:
    • Ribulose 5-phosphate 3-epimerase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Ribulose 5-phosphate[c] <=> 1.0 D-Xylulose 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 5.1.3.1
  • BioCyc : META:RIBULP3EPIM-RXN
  • MetaNetX (MNX) Equation : MNXR104083
  • RHEA:
  • Reactome : REACT_R-ATH-199803
  • KEGG Reaction : R01529




Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=RPE&oldid=10549"