Difference between revisions of "Frdp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CPPPGO CPPPGO] == * direction: ** LEFT-TO-RIGHT * common name: ** Coproporphyrinogen oxidase (O2 re...")
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/frdp frdp] == * common name: ** Farnesyl diphosphate * Synonym(s): == Reaction(s) known to c...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CPPPGO CPPPGO] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/frdp frdp] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** Coproporphyrinogen oxidase (O2 required)
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** Farnesyl diphosphate
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[UDCPDPS]]
** 1.0 [[o2]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[cpppg3]][c] '''=>''' 1.0 [[pppg9]][c] '''+''' 2.0 [[co2]][c] '''+''' 2.0 [[h2o]][c]
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* [[OCTDPS]]
* With common name(s):
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== Reaction(s) known to produce the compound ==
** 1.0 O2 O2[c] '''+''' 2.0 H+[c] '''+''' 1.0 Coproporphyrinogen III[c] '''=>''' 1.0 Protoporphyrinogen IX[c] '''+''' 2.0 CO2 CO2[c] '''+''' 2.0 H2O H2O[c]
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* [[GRTT]]
 
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== Reaction(s) of unknown directionality ==
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[EF1305]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
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** '''4''' reactions found over '''106''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=Farnesyl diphosphate}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18257 18257]
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{{#set: consumed by=UDCPDPS|OCTDPS}}
* BioCyc : META:RXN0-1461
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{{#set: produced by=GRTT}}
* MetaNetX (MNX) Equation : MNXR96880
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* KEGG Reaction : R03220
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* EC Number : 1.3.3.3
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Coproporphyrinogen oxidase (O2 required)}}
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{{#set: gene associated=EF1305}}
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{{#set: in pathway=map01100|map01110|map00860}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
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Latest revision as of 15:32, 21 March 2018

Metabolite frdp

  • common name:
    • Farnesyl diphosphate
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links