Difference between revisions of "VALTRS"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pi pi] == * common name: ** Phosphate * Synonym(s): == Reaction(s) known to consume the comp...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/VALTRS VALTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Valyl-tRNA synthetase * Synonym(s...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/pi pi] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/VALTRS VALTRS] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Phosphate
+
** Valyl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[ACPPAT141]]
+
* With identifiers:
* [[ACPPAT140]]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[val__L]][c] '''+''' 1.0 [[trnaval]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[valtrna]][c] '''+''' 1.0 [[ppi]][c]
* [[ACPPAT161]]
+
* With common name(s):
* [[ACPPAT160]]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Valine[c] '''+''' 1.0 TRNA(Val)[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Valyl-tRNA(Val)[c] '''+''' 1.0 Diphosphate[c]
* [[TransportSeed_pi]]
+
 
* [[PTA2]]
+
== Genes associated with this reaction  ==
* [[PIabc]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[ACPPAT120]]
+
* Gene: [[EF2931]]
* [[ACPPAT181]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
* [[ACPPAT180]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[EX_pi]]
+
== Pathways  ==
* [[PKETF]]
+
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
== Reaction(s) known to produce the compound ==
+
** '''23''' reactions found over '''49''' reactions in the full pathway
* [[CRTNsyn]]
+
== Reconstruction information  ==
* [[NTD10]]
+
* Category: [[orthology]]
* [[GLNS]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[PYNP1]]
+
*** Tool: [[pantograph]]
* [[ARGabc]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
* [[GLYBabc]]
+
*** Tool: [[pantograph]]
* [[DDPA]]
+
* [[SELCYSS]]
+
* [[PRAIS]]
+
* [[METabc]]
+
* [[PRFGS_1]]
+
* [[G2PP]]
+
* [[THRS]]
+
* [[APH140]]
+
* [[APH141]]
+
* [[FERRICHabc]]
+
* [[PRFGS]]
+
* [[APG3PAT161]]
+
* [[APG3PAT160]]
+
* [[CA2abc1]]
+
* [[CTBTCAL2]]
+
* [[ASPCT]]
+
* [[UAMAGS]]
+
* [[DHQS]]
+
* [[NTP3]]
+
* [[NTP1]]
+
* [[NTP5]]
+
* [[PPTHppc]]
+
* [[NO3abc]]
+
* [[CD2abc1]]
+
* [[APG3PAT181]]
+
* [[APG3PAT180]]
+
* [[PC]]
+
* [[SPMDabc]]
+
* [[ARSENBabc]]
+
* [[NIabc]]
+
* [[APH120]]
+
* [[PTRCabc]]
+
* [[PPNCL]]
+
* [[PGPP_LPL]]
+
* [[APG3PAT141]]
+
* [[APG3PAT140]]
+
* [[ZNabc]]
+
* [[biomass_LPL60]]
+
* [[METSRabc]]
+
* [[DALTAL]]
+
* [[SELNPS]]
+
* [[CHORS]]
+
* [[GTHS]]
+
* [[CHLabc]]
+
* [[ADSS]]
+
* [[UAGCVT]]
+
* [[MALTabc]]
+
* [[UGMDDS2_LPL]]
+
* [[DPMVD]]
+
* [[PROTS_LPL_v60]]
+
* [[G5SD]]
+
* [[CRNCAL2]]
+
* [[GLUCYS]]
+
* [[CTPS2]]
+
* [[CTPS1]]
+
* [[CRNabc]]
+
* [[METSabc]]
+
* [[AKP1]]
+
* [[Cut1]]
+
* [[MI1PP]]
+
* [[AHMMPS_LPL]]
+
* [[UAMAS]]
+
* [[UAAGLS1]]
+
* [[AIRC1]]
+
* [[AIRC2]]
+
* [[CBPS]]
+
* [[CRTNsyn_cho]]
+
* [[KDOPS]]
+
* [[CTBTabc]]
+
* [[UDCPDP]]
+
* [[NTP10]]
+
* [[UGMDDS]]
+
* [[GLNabc]]
+
* [[FBP]]
+
* [[APG3PAT120]]
+
* [[TransportSeed_pi]]
+
* [[CRNDCAL2]]
+
* [[RNAS_LPL]]
+
* [[GAPDi_nadp]]
+
* [[NTD8]]
+
* [[2MAHMP]]
+
* [[TDP]]
+
* [[PRAIS_1]]
+
* [[DHFS]]
+
* [[FERXAabc]]
+
* [[COBALT2abcpppe]]
+
* [[PIabc]]
+
* [[NTD9]]
+
* [[ECTOINEabc]]
+
* [[CYSabc2pppe]]
+
* [[ACYP_2]]
+
* [[PPA]]
+
* [[DARTAL]]
+
* [[CHOLSabc_1]]
+
* [[APH180]]
+
* [[APH181]]
+
* [[PPS]]
+
* [[DNAS_LPL]]
+
* [[PGLYCP]]
+
* [[GBBTNabc]]
+
* [[PURabc1]]
+
* [[APH160]]
+
* [[APH161]]
+
* [[NTD6]]
+
* [[NTD7]]
+
* [[NTD4]]
+
* [[NTD5]]
+
* [[NTD2]]
+
* [[NTD3]]
+
* [[NTD1]]
+
* [[MG2abc]]
+
* [[METDabc]]
+
* [[FTHFLi]]
+
* [[METAT]]
+
* [[FTHFCL]]
+
* [[MGSA]]
+
* [[MNabc]]
+
* [[ALKP]]
+
* [[UAAGDS]]
+
* [[PROLBabc]]
+
* [[ZN2abcpppe]]
+
* [[NI2abcpppe]]
+
* [[ACCOAC]]
+
== Reaction(s) of unknown directionality ==
+
* [[PBUTT]]
+
* [[ALALAC]]
+
* [[PRASCSi_copy1]]
+
* [[ATPS3r]]
+
* [[ASAD]]
+
* [[MALP]]
+
* [[3NUCLE1]]
+
* [[3NUCLE3]]
+
* [[3NUCLE2]]
+
* [[3NUCLE4]]
+
* [[PRASCSi]]
+
* [[PTAr]]
+
* [[PIt2r]]
+
* [[PRAGSr]]
+
* [[TMDPP]]
+
* [[PKL]]
+
* [[GAPD]]
+
* [[ExchangeSeed_pi]]
+
* [[OCBT_1]]
+
* [[OCBT]]
+
* [[THFGLUS]]
+
* [[DURIPP]]
+
* [[PYNP2r]]
+
* [[PUNP1]]
+
* [[GLNTAL]]
+
* [[PUNP8]]
+
* [[PUNP4]]
+
* [[PNP]]
+
* [[MPL]]
+
* [[PUNP7]]
+
* [[ALAALAr]]
+
* [[PUNP2]]
+
* [[PUNP3]]
+
* [[PSCVT]]
+
* [[PUNP6]]
+
* [[PUNP5]]
+
 
== External links  ==
 
== External links  ==
{{#set: common name=Phosphate}}
+
* Reactome : REACT_R-HSA-380042
{{#set: consumed by=ACPPAT141|ACPPAT140|ACPPAT161|ACPPAT160|TransportSeed_pi|PTA2|PIabc|ACPPAT120|ACPPAT181|ACPPAT180|EX_pi|PKETF}}
+
* MetaNetX (MNX) Equation : MNXR105186
{{#set: produced by=CRTNsyn|NTD10|GLNS|PYNP1|ARGabc|GLYBabc|DDPA|SELCYSS|PRAIS|METabc|PRFGS_1|G2PP|THRS|APH140|APH141|FERRICHabc|PRFGS|APG3PAT161|APG3PAT160|CA2abc1|CTBTCAL2|ASPCT|UAMAGS|DHQS|NTP3|NTP1|NTP5|PPTHppc|NO3abc|CD2abc1|APG3PAT181|APG3PAT180|PC|SPMDabc|ARSENBabc|NIabc|APH120|PTRCabc|PPNCL|PGPP_LPL|APG3PAT141|APG3PAT140|ZNabc|biomass_LPL60|METSRabc|DALTAL|SELNPS|CHORS|GTHS|CHLabc|ADSS|UAGCVT|MALTabc|UGMDDS2_LPL|DPMVD|PROTS_LPL_v60|G5SD|CRNCAL2|GLUCYS|CTPS2|CTPS1|CRNabc|METSabc|AKP1|Cut1|MI1PP|AHMMPS_LPL|UAMAS|UAAGLS1|AIRC1|AIRC2|CBPS|CRTNsyn_cho|KDOPS|CTBTabc|UDCPDP|NTP10|UGMDDS|GLNabc|FBP|APG3PAT120|TransportSeed_pi|CRNDCAL2|RNAS_LPL|GAPDi_nadp|NTD8|2MAHMP|TDP|PRAIS_1|DHFS|FERXAabc|COBALT2abcpppe|PIabc|NTD9|ECTOINEabc|CYSabc2pppe|ACYP_2|PPA|DARTAL|CHOLSabc_1|APH180|APH181|PPS|DNAS_LPL|PGLYCP|GBBTNabc|PURabc1|APH160|APH161|NTD6|NTD7|NTD4|NTD5|NTD2|NTD3|NTD1|MG2abc|METDabc|FTHFLi|METAT|FTHFCL|MGSA|MNabc|ALKP|UAAGDS|PROLBabc|ZN2abcpppe|NI2abcpppe|ACCOAC}}
+
* KEGG Reaction : R03665
{{#set: consumed or produced by=PBUTT|ALALAC|PRASCSi_copy1|ATPS3r|ASAD|MALP|3NUCLE1|3NUCLE3|3NUCLE2|3NUCLE4|PRASCSi|PTAr|PIt2r|PRAGSr|TMDPP|PKL|GAPD|ExchangeSeed_pi|OCBT_1|OCBT|THFGLUS|DURIPP|PYNP2r|PUNP1|GLNTAL|PUNP8|PUNP4|PNP|MPL|PUNP7|ALAALAr|PUNP2|PUNP3|PSCVT|PUNP6|PUNP5}}
+
* EC Number : 6.1.1.9
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Valyl-tRNA synthetase}}
 +
{{#set: gene associated=EF2931}}
 +
{{#set: in pathway=map00970}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:35, 21 March 2018

Reaction VALTRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Valyl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 L-Valine[c] + 1.0 TRNA(Val)[c] => 1.0 AMP C10H12N5O7P[c] + 1.0 L-Valyl-tRNA(Val)[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • Reactome : REACT_R-HSA-380042
  • MetaNetX (MNX) Equation : MNXR105186
  • KEGG Reaction : R03665
  • EC Number : 6.1.1.9