Difference between revisions of "Uri"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTDK2 CYTDK2] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytidine kinase (GTP) * Synonym(s...")
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/uri uri] == * common name: ** Uridine * Synonym(s): == Reaction(s) known to consume the comp...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTDK2 CYTDK2] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/uri uri] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** Cytidine kinase (GTP)
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** Uridine
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[URIK2]]
** 1.0 [[cytd]][c] '''+''' 1.0 [[gtp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[gdp]][c] '''+''' 1.0 [[cmp]][c]
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* [[URIK3]]
* With common name(s):
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* [[URIH]]
** 1.0 Cytidine[c] '''+''' 1.0 GTP C10H12N5O14P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 GDP C10H12N5O11P2[c] '''+''' 1.0 CMP C9H12N3O8P[c]
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* [[URIK1]]
 
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== Reaction(s) known to produce the compound ==
== Genes associated with this reaction  ==
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* [[NTD2]]
Genes have been associated with this reaction based on different elements listed below.
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* [[CYTD]]
* [[EF0825]]
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== Reaction(s) of unknown directionality ==
** [[pantograph]]-[[l_plantarum_wcfs1]]
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* [[PYNP2r]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[3NUCLE2]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
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** '''82''' reactions found over '''244''' reactions in the full pathway
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
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** '''22''' reactions found over '''72''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[e_coli_sstr_k12_substr_mg1655]]
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*** [[l_plantarum_wcfs1]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=Uridine}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28162 28162]
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{{#set: consumed by=URIK2|URIK3|URIH|URIK1}}
* BioCyc : META:CYTIDINEKIN-RXN
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{{#set: produced by=NTD2|CYTD}}
* MetaNetX (MNX) Equation : MNXR97042
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{{#set: reversible reaction associated=PYNP2r|3NUCLE2}}
* KEGG Reaction : R00517
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* EC Number : 2.7.1.213
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Cytidine kinase (GTP)}}
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{{#set: gene associated=EF0825}}
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{{#set: in pathway=map00240|map01100|map00983}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
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Latest revision as of 15:36, 21 March 2018

Metabolite uri

  • common name:
    • Uridine
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links