Difference between revisions of "GLYCK"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/met__L met__L] == * common name: ** L-Methionine * Synonym(s): == Reaction(s) known to consu...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCK GLYCK] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerate kinase * Synonym(s): ==...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/met__L met__L] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCK GLYCK] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** L-Methionine
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** Glycerate kinase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[TransportSeed_met__L]]
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* With identifiers:
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* [[METSR_R2]]
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** 1.0 [[atp]][c] '''+''' 1.0 [[glyc__R]][c] '''=>''' 1.0 [[3pg]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c]
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* [[METTRS]]
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* With common name(s):
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* [[METabc]]
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 (R)-Glycerate[c] '''=>''' 1.0 3-Phospho-D-glycerate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c]
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* [[METAT]]
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* [[METSR_S2]]
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== Genes associated with this reaction  ==
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== Reaction(s) known to produce the compound ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[METS]]
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* Gene: [[EF2646]]
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* [[TransportSeed_met__L]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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* [[METSR_R1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[FMETDF]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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* [[METabc]]
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== Pathways  ==
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* [[METSOXR2]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[METSOXR1]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[METSR_S1]]
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* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
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== Reaction(s) of unknown directionality ==
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** '''21''' reactions found over '''129''' reactions in the full pathway
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* [[ExchangeSeed_met__L]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''179''' reactions found over '''1054''' reactions in the full pathway
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* [[map00561]]: [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561]
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** '''7''' reactions found over '''83''' reactions in the full pathway
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* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
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** '''45''' reactions found over '''220''' reactions in the full pathway
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* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
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** '''23''' reactions found over '''133''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''135''' reactions found over '''694''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=L-Methionine}}
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* EC Number : 2.7.1.31
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{{#set: consumed by=TransportSeed_met__L|METSR_R2|METTRS|METabc|METAT|METSR_S2}}
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* BioCyc : META:GLY3KIN-RXN
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{{#set: produced by=METS|TransportSeed_met__L|METSR_R1|FMETDF|METabc|METSOXR2|METSOXR1|METSR_S1}}
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* MetaNetX (MNX) Equation : MNXR100328
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{{#set: consumed or produced by=ExchangeSeed_met__L}}
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23516 23516]
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* Reactome : REACT_R-BTA-6799495
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* KEGG Reaction : R01514
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Glycerate kinase}}
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{{#set: gene associated=EF2646}}
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{{#set: in pathway=map01100|map00630|map01110|map00561|map01200|map00260|map01130}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:36, 21 March 2018

Reaction GLYCK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycerate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 (R)-Glycerate[c] => 1.0 3-Phospho-D-glycerate[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.1.31
  • BioCyc : META:GLY3KIN-RXN
  • MetaNetX (MNX) Equation : MNXR100328
  • RHEA:
  • Reactome : REACT_R-BTA-6799495
  • KEGG Reaction : R01514




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