Difference between revisions of "PUNP4"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_arg__L ExchangeSeed_arg__L] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP4 PUNP4] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Deoxy...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_arg__L ExchangeSeed_arg__L] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP4 PUNP4] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** Purine-nucleoside phosphorylase (Deoxyguanosine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[arg__L]][C-BOUNDARY] '''<=>''' 1.0 [[arg__L]][e]
+
** 1.0 [[dgsn]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[2dr1p]][c] '''+''' 1.0 [[gua]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Arginine[C-BOUNDARY] '''<=>''' 1.0 L-Arginine[e]
+
** 1.0 Deoxyguanosine[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 2-Deoxy-D-ribose 1-phosphate[c] '''+''' 1.0 Guanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF0187]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0186]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 +
** '''22''' reactions found over '''72''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[added to manage seeds from boundary to extracellular compartment]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27738 27738]
 +
* BioCyc : META:DEOXYGUANPHOSPHOR-RXN
 +
* MetaNetX (MNX) Equation : MNXR103346
 +
* KEGG Reaction : R01969
 +
* EC Number : 2.4.2.1
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: in pathway=}}
+
{{#set: common name=Purine-nucleoside phosphorylase (Deoxyguanosine)}}
{{#set: reconstruction category=manual}}
+
{{#set: gene associated=EF0187|EF0186}}
{{#set: reconstruction source=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: in pathway=map00240|map01100|map00983|map00230}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:39, 21 March 2018

Reaction PUNP4

  • direction:
    • REVERSIBLE
  • common name:
    • Purine-nucleoside phosphorylase (Deoxyguanosine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Deoxyguanosine[c] + 1.0 Phosphate[c] <=> 1.0 2-Deoxy-D-ribose 1-phosphate[c] + 1.0 Guanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:DEOXYGUANPHOSPHOR-RXN
  • MetaNetX (MNX) Equation : MNXR103346
  • KEGG Reaction : R01969
  • EC Number : 2.4.2.1