Difference between revisions of "CHOLD2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD4 NTD4] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (CMP) * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CHOLD2 CHOLD2] == * direction: ** LEFT-TO-RIGHT * common name: ** Choline dehydrogenase FAD depend...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD4 NTD4] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CHOLD2 CHOLD2] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 5'-nucleotidase (CMP)
+
** Choline dehydrogenase  FAD dependent
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[cmp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[cytd]][c]
+
** 1.0 [[chol]][c] '''+''' 1.0 [[fad]][c] '''=>''' 1.0 [[fadh2]][c] '''+''' 1.0 [[betald]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 CMP C9H12N3O8P[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Cytidine[c]
+
** 1.0 Choline C5H14NO[c] '''+''' 1.0 Flavin adenine dinucleotide oxidized[c] '''=>''' 1.0 Flavin adenine dinucleotide reduced[c] '''+''' 1.0 Betaine aldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0062]]
+
* Gene: [[EF1624]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0900]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF1635]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''82''' reactions found over '''244''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** [[b_subtilis_subsp_subtilis_str168]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* Reactome : REACT_R-ATH-6797961
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29367 29367]
+
* MetaNetX (MNX) Equation : MNXR96698
* BioCyc : META:RXN-14026
+
* EC Number : 1.1.99.1
* MetaNetX (MNX) Equation : MNXR102034
+
* KEGG Reaction : R00511
+
* EC Number : 3.1.3.5
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=5'-nucleotidase (CMP)}}
+
{{#set: common name=Choline dehydrogenase  FAD dependent }}
{{#set: gene associated=EF0062}}
+
{{#set: gene associated=EF1624|EF0900|EF1635}}
{{#set: in pathway=map00240}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:39, 21 March 2018

Reaction CHOLD2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Choline dehydrogenase FAD dependent
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Choline C5H14NO[c] + 1.0 Flavin adenine dinucleotide oxidized[c] => 1.0 Flavin adenine dinucleotide reduced[c] + 1.0 Betaine aldehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • Reactome : REACT_R-ATH-6797961
  • MetaNetX (MNX) Equation : MNXR96698
  • EC Number : 1.1.99.1