Difference between revisions of "PYK"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] == * direction: ** REVERSIBLE * common name: ** D-alanine-D-alanine ligase (revers...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PYK PYK] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyruvate kinase * Synonym(s): == React...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PYK PYK] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** D-alanine-D-alanine ligase (reversible)
+
** Pyruvate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2.0 [[ala__D]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[alaala]][c] '''+''' 1.0 [[adp]][c]
+
** 1.0 [[pep]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''=>''' 1.0 [[atp]][c] '''+''' 1.0 [[pyr]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2.0 D-Alanine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 D-Alanyl-D-alanine[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
+
** 1.0 Phosphoenolpyruvate[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''=>''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0843]]
+
* Gene: [[EF1046]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00473]]: [http://www.genome.jp/dbget-bin/www_bget?map00473 map00473]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''10''' reactions found over '''27''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''45''' reactions found over '''220''' reactions in the full pathway
 +
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 +
** '''31''' reactions found over '''163''' reactions in the full pathway
 +
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 +
** '''24''' reactions found over '''149''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.7.1.40
 +
* BioCyc : META:PEPDEPHOS-RXN
 +
* MetaNetX (MNX) Equation : MNXR103371
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11224 11224]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18157 18157]
−
* BioCyc : META:DALADALALIG-RXN
+
* Reactome : REACT_R-ATH-71670
−
* MetaNetX (MNX) Equation : MNXR95678
+
* KEGG Reaction : R00200
−
* KEGG Reaction : R01150
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* EC Number : 6.3.2.4
+
{{#set: common name=Pyruvate kinase}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=EF1046}}
−
{{#set: common name=D-alanine-D-alanine ligase (reversible)}}
+
{{#set: in pathway=map01100|map01110|map00230|map01120|map01200|map00620|map00010|map01230|map01130}}
−
{{#set: gene associated=EF0843}}
+
−
{{#set: in pathway=map00473|map01100|map00550}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}}
 

Latest revision as of 15:41, 21 March 2018

Reaction PYK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyruvate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Phosphoenolpyruvate[c] + 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c] => 1.0 ATP C10H12N5O13P3[c] + 1.0 Pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.1.40
  • BioCyc : META:PEPDEPHOS-RXN
  • MetaNetX (MNX) Equation : MNXR103371
  • RHEA:
  • Reactome : REACT_R-ATH-71670
  • KEGG Reaction : R00200




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