Difference between revisions of "5DOAN"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/THDPS THDPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Tetrahydrodipicolinate succinylase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/5DOAN 5DOAN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-deoxyadenosine nuclosidase * Syn...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/THDPS THDPS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/5DOAN 5DOAN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Tetrahydrodipicolinate succinylase
+
** 5'-deoxyadenosine nuclosidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[thdp]][c] '''+''' 1.0 [[succoa]][c] '''=>''' 1.0 [[coa]][c] '''+''' 1.0 [[sl2a6o]][c]
+
** 1.0 [[dad_5]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[5drib]][c] '''+''' 1.0 [[ade]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 2,3,4,5-Tetrahydrodipicolinate[c] '''+''' 1.0 Succinyl-CoA[c] '''=>''' 1.0 Coenzyme A[c] '''+''' 1.0 N-Succinyl-2-L-amino-6-oxoheptanedioate[c]
+
** 1.0 5'-Deoxyadenosine[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 5'-deoxyribose[c] '''+''' 1.0 Adenine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1133]]
+
* Gene: [[EF2694]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''83''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
 
−
** '''13''' reactions found over '''34''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''111''' reactions found over '''715''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** Tool: [[pantograph]]
−
*** [[l_plantarum_wcfs1]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17325 17325]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29859 29859]
−
* BioCyc : META:TETHYDPICSUCC-RXN
+
* MetaNetX (MNX) Equation : MNXR95069
−
* MetaNetX (MNX) Equation : MNXR104806
+
* BioCyc : META:RXN0-6550
−
* KEGG Reaction : R04365
+
−
* EC Number : 2.3.1.117
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Tetrahydrodipicolinate succinylase}}
+
{{#set: common name=5'-deoxyadenosine nuclosidase}}
−
{{#set: gene associated=EF1133}}
+
{{#set: gene associated=EF2694}}
−
{{#set: in pathway=map01100|map01230|map00300|map01120}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
 

Latest revision as of 15:06, 21 March 2018

Reaction 5DOAN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-deoxyadenosine nuclosidase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5'-Deoxyadenosine[c] + 1.0 H2O H2O[c] => 1.0 5'-deoxyribose[c] + 1.0 Adenine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR95069
  • BioCyc : META:RXN0-6550




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