Difference between revisions of "SELNPS"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/gly gly] == * common name: ** Glycine * Synonym(s): == Reaction(s) known to consume the comp...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SELNPS SELNPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Selenophosphate synthase * Synony...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/gly gly] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/SELNPS SELNPS] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Glycine
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** Selenophosphate synthase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[GLYTRS]]
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* With identifiers:
* [[TransportSeed_gly]]
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** 1.0 [[h2o]][c] '''+''' 1.0 [[seln]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[selnp]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[amp]][c]
* [[GLYt2pp_copy1]]
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* With common name(s):
* [[GTHS]]
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** 1.0 H2O H2O[c] '''+''' 1.0 Selenide[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Selenophosphate[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
* [[GLYO1]]
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== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
* [[TransportSeed_gly]]
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Genes have been associated with this reaction based on different elements listed below.
* [[ALDD31_1]]
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* Gene: [[EF2567]]
* [[GLYt2pp_copy1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[THRAi]]
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== Pathways  ==
* [[THRA2i]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
== Reaction(s) of unknown directionality ==
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** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[GHMT2r]]
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* [[map00450]]: [http://www.genome.jp/dbget-bin/www_bget?map00450 map00450]
* [[GLYTA]]
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** '''6''' reactions found over '''35''' reactions in the full pathway
* [[ExchangeSeed_gly]]
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== Reconstruction information  ==
* [[AGTi]]
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* Category: [[orthology]]
* [[GLYAMDTRc]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[PRAGSr]]
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*** Tool: [[pantograph]]
* [[GLYDHDA]]
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== External links  ==
 
== External links  ==
{{#set: common name=Glycine}}
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* RHEA:
{{#set: consumed by=GLYTRS|TransportSeed_gly|GLYt2pp_copy1|GTHS|GLYO1}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
{{#set: produced by=TransportSeed_gly|ALDD31_1|GLYt2pp_copy1|THRAi|THRA2i}}
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* BioCyc : META:2.7.9.3-RXN
{{#set: reversible reaction associated=GHMT2r|GLYTA|ExchangeSeed_gly|AGTi|GLYAMDTRc|PRAGSr|GLYDHDA}}
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* MetaNetX (MNX) Equation : MNXR104322
 +
* KEGG Reaction : R03595
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* EC Number : 2.7.9.3
 +
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Selenophosphate synthase}}
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{{#set: gene associated=EF2567}}
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{{#set: in pathway=map01100|map00450}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:19, 21 March 2018

Reaction SELNPS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Selenophosphate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Selenide[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 Selenophosphate[c] + 1.0 Phosphate[c] + 1.0 AMP C10H12N5O7P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:2.7.9.3-RXN
  • MetaNetX (MNX) Equation : MNXR104322
  • KEGG Reaction : R03595
  • EC Number : 2.7.9.3