Difference between revisions of "OBTFL"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920] == * common_name: ** Sulfur metabolism * Synonym(s): == Reaction(s) found == '''5...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OBTFL OBTFL] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-Oxobutanoate formate lyase * Syno...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00920 map00920] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/OBTFL OBTFL] ==
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* common_name:
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* direction:
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** Sulfur metabolism
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** LEFT-TO-RIGHT
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* common name:
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** 2-Oxobutanoate formate lyase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''56''' reactions in the full pathway
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* With identifiers:
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* [[CYANST]]
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** 1.0 [[2obut]][c] '''+''' 1.0 [[coa]][c] '''=>''' 1.0 [[for]][c] '''+''' 1.0 [[ppcoa]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[EF2988]]
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** 1.0 2-Oxobutanoate[c] '''+''' 1.0 Coenzyme A[c] '''=>''' 1.0 Formate[c] '''+''' 1.0 Propanoyl-CoA[c]
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*** [[EF2990]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[CYSS]]
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* Gene: [[EF1612]]
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** 2 associated gene(s):
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[EF0289]]
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* Gene: [[EF1613]]
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*** [[EF1584]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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*** [[orthology-l_plantarum_wcfs1]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[SERAT]]
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* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
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** 1 associated gene(s):
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** '''15''' reactions found over '''143''' reactions in the full pathway
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*** [[EF0044]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** 3 reconstruction source(s) associated:
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** '''104''' reactions found over '''715''' reactions in the full pathway
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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** '''31''' reactions found over '''163''' reactions in the full pathway
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*** [[orthology-l_plantarum_wcfs1]]
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* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
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* [[SHSL1]]
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** '''14''' reactions found over '''156''' reactions in the full pathway
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** 1 associated gene(s):
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== Reconstruction information  ==
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*** [[EF0290]]
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* Category: [[orthology]]
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** 1 reconstruction source(s) associated:
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** [[orthology-e_coli_sstr_k12_substr_mg1655]]
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*** Tool: [[pantograph]]
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* [[SLCYSS]]
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** 1 associated gene(s):
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*** [[EF1584]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-b_subtilis_subsp_subtilis_str168]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/AASPh AASPh]
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* [http://bigg.ucsd.edu/universal/reactions/AASPm AASPm]
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* [http://bigg.ucsd.edu/universal/reactions/ACHMSSELCYSL ACHMSSELCYSL]
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* [http://bigg.ucsd.edu/universal/reactions/ACHMSSELCYSLh ACHMSSELCYSLh]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERL ACSERL]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERLh ACSERLh]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERLm ACSERLm]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERSULL ACSERSULL]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERSULLh ACSERSULLh]
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* [http://bigg.ucsd.edu/universal/reactions/ACSERSULLm ACSERSULLm]
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* [http://bigg.ucsd.edu/universal/reactions/ADSELK ADSELK]
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* [http://bigg.ucsd.edu/universal/reactions/ADSK ADSK]
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* [http://bigg.ucsd.edu/universal/reactions/AHSL AHSL]
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* [http://bigg.ucsd.edu/universal/reactions/BPNT BPNT]
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* [http://bigg.ucsd.edu/universal/reactions/BPNT2 BPNT2]
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* [http://bigg.ucsd.edu/universal/reactions/CYANSTm CYANSTm]
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* [http://bigg.ucsd.edu/universal/reactions/CYANSTpp CYANSTpp]
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* [http://bigg.ucsd.edu/universal/reactions/CYSS_1 CYSS_1]
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* [http://bigg.ucsd.edu/universal/reactions/FDMO FDMO]
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* [http://bigg.ucsd.edu/universal/reactions/FDMO2 FDMO2]
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* [http://bigg.ucsd.edu/universal/reactions/FDMO4 FDMO4]
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* [http://bigg.ucsd.edu/universal/reactions/HSST HSST]
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* [http://bigg.ucsd.edu/universal/reactions/METB1 METB1]
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* [http://bigg.ucsd.edu/universal/reactions/PAPSR PAPSR]
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* [http://bigg.ucsd.edu/universal/reactions/PAPSR2 PAPSR2]
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* [http://bigg.ucsd.edu/universal/reactions/PAPSSH PAPSSH]
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* [http://bigg.ucsd.edu/universal/reactions/SADT SADT]
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* [http://bigg.ucsd.edu/universal/reactions/SADT2 SADT2]
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* [http://bigg.ucsd.edu/universal/reactions/SAT SAT]
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* [http://bigg.ucsd.edu/universal/reactions/SATm SATm]
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* [http://bigg.ucsd.edu/universal/reactions/SELADT SELADT]
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* [http://bigg.ucsd.edu/universal/reactions/SHSL1h SHSL1h]
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* [http://bigg.ucsd.edu/universal/reactions/SHSL2h SHSL2h]
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* [http://bigg.ucsd.edu/universal/reactions/SHSL2r SHSL2r]
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* [http://bigg.ucsd.edu/universal/reactions/SLFAT SLFAT]
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* [http://bigg.ucsd.edu/universal/reactions/SO3R SO3R]
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* [http://bigg.ucsd.edu/universal/reactions/SUCHMSSELCYSL SUCHMSSELCYSL]
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* [http://bigg.ucsd.edu/universal/reactions/SUCHMSSELCYSLh SUCHMSSELCYSLh]
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* [http://bigg.ucsd.edu/universal/reactions/SULFOX SULFOX]
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* [http://bigg.ucsd.edu/universal/reactions/SULO SULO]
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* [http://bigg.ucsd.edu/universal/reactions/SULOm SULOm]
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* [http://bigg.ucsd.edu/universal/reactions/SULR SULR]
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* [http://bigg.ucsd.edu/universal/reactions/SULabc SULabc]
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* [http://bigg.ucsd.edu/universal/reactions/SULabcpp SULabcpp]
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* [http://bigg.ucsd.edu/universal/reactions/TAUDO TAUDO]
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* [http://bigg.ucsd.edu/universal/reactions/TAURabc TAURabc]
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* [http://bigg.ucsd.edu/universal/reactions/TAURabcpp TAURabcpp]
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* [http://bigg.ucsd.edu/universal/reactions/TSULabc TSULabc]
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* [http://bigg.ucsd.edu/universal/reactions/TSULabcpp TSULabcpp]
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* [http://bigg.ucsd.edu/universal/reactions/TSULth TSULth]
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* [http://bigg.ucsd.edu/universal/reactions/TSULtm TSULtm]
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== External links  ==
 
== External links  ==
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{{#set: common_name=Sulfur metabolism}}
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* RHEA:
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{{#set: reaction found=5}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28054 28054]
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{{#set: total reaction=56}}
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* BioCyc : META:KETOBUTFORMLY-RXN
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{{#set: completion rate=9.0}}
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* MetaNetX (MNX) Equation : MNXR102135
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* KEGG Reaction : R06987
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* EC Number : 2.3.1
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-Oxobutanoate formate lyase}}
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{{#set: gene associated=EF1612|EF1613}}
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{{#set: in pathway=map01100|map00640|map01120|map00620|map00650}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:24, 21 March 2018

Reaction OBTFL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-Oxobutanoate formate lyase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Oxobutanoate[c] + 1.0 Coenzyme A[c] => 1.0 Formate[c] + 1.0 Propanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:KETOBUTFORMLY-RXN
  • MetaNetX (MNX) Equation : MNXR102135
  • KEGG Reaction : R06987
  • EC Number : 2.3.1




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