Difference between revisions of "NTD7"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ASPTRS ASPTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Aspartyl-tRNA synthetase * Synony...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD7 NTD7] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (AMP) * Synonym(s):...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ASPTRS ASPTRS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD7 NTD7] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aspartyl-tRNA synthetase
+
** 5'-nucleotidase (AMP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[trnaasp]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[asp__L]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[asptrna]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[amp]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[adn]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 TRNA(Asp)[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Aspartate[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Aspartyl-tRNA(Asp)[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Adenosine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1970]]
+
* Gene: [[EF0062]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''23''' reactions found over '''49''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 +
* [[map00760]]: [http://www.genome.jp/dbget-bin/www_bget?map00760 map00760]
 +
** '''19''' reactions found over '''97''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-l_plantarum_wcfs1]]
+
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR96101
+
* RHEA:
−
* KEGG Reaction : R05577
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29375 29375]
−
* EC Number : 6.1.1.12
+
* BioCyc : META:AMP-DEPHOSPHORYLATION-RXN
 +
* MetaNetX (MNX) Equation : MNXR102037
 +
* KEGG Reaction : R00183
 +
* EC Number : 3.1.3.5
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aspartyl-tRNA synthetase}}
+
{{#set: common name=5'-nucleotidase (AMP)}}
−
{{#set: gene associated=EF1970}}
+
{{#set: gene associated=EF0062}}
−
{{#set: in pathway=map00970}}
+
{{#set: in pathway=map01100|map00240|map01110|map00230|map00760}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:25, 21 March 2018

Reaction NTD7

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase (AMP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 AMP C10H12N5O7P[c] => 1.0 Phosphate[c] + 1.0 Adenosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:AMP-DEPHOSPHORYLATION-RXN
  • MetaNetX (MNX) Equation : MNXR102037
  • KEGG Reaction : R00183
  • EC Number : 3.1.3.5




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