Difference between revisions of "DRBK"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ITCY ITCY] == * direction: ** LEFT-TO-RIGHT * common name: ** ITP:cytidine 5'-phosphotransferase *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DRBK DRBK] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyribokinase * Synonym(s): == Rea...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ITCY ITCY] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DRBK DRBK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** ITP:cytidine 5'-phosphotransferase
+
** Deoxyribokinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[itp]][c] '''+''' 1.0 [[cytd]][c] '''=>''' 1.0 [[cmp]][c] '''+''' 1.0 [[idp]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[drib]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[2dr5p]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 ITP C10H11N4O14P3[c] '''+''' 1.0 Cytidine[c] '''=>''' 1.0 CMP C9H12N3O8P[c] '''+''' 1.0 IDP C10H11N4O11P2[c] '''+''' 1.0 H+[c]
+
** 1.0 Deoxyribose C5H10O4[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 2-Deoxy-D-ribose 5-phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0825]]
+
* Gene: [[EF2961]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''26''' reactions found over '''69''' reactions in the full pathway
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
** '''82''' reactions found over '''244''' reactions in the full pathway
+
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
+
** '''22''' reactions found over '''72''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 32: Line 28:
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR100885
+
* MetaNetX (MNX) Equation : MNXR97781
* KEGG Reaction : R00962
+
* KEGG Reaction : R02750
* EC Number : 2.7.1.48
+
* EC Number : 2.7.1.15
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=ITP:cytidine 5'-phosphotransferase}}
+
{{#set: common name=Deoxyribokinase}}
{{#set: gene associated=EF0825}}
+
{{#set: gene associated=EF2961}}
{{#set: in pathway=map01100|map00240|map00983}}
+
{{#set: in pathway=map00030}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:27, 21 March 2018

Reaction DRBK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Deoxyribokinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Deoxyribose C5H10O4[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 H+[c] + 1.0 2-Deoxy-D-ribose 5-phosphate[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR97781
  • KEGG Reaction : R02750
  • EC Number : 2.7.1.15