Difference between revisions of "RNDR1"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NADHPO NADHPO] == * direction: ** LEFT-TO-RIGHT * common name: ** NADH peroxidase * Synonym(s): ==...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR1 RNDR1] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside-diphosphate reductas...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/RNDR1 RNDR1] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Ribonucleoside-diphosphate reductase (ADP) |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[adp]][c] '''+''' 1.0 [[trdrd]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[trdox]][c] '''+''' 1.0 [[dadp]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Reduced thioredoxin[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Oxidized thioredoxin[c] '''+''' 1.0 DADP C10H12N5O9P2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF0472]] |
| − | ** [[ | + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| + | * Gene: [[EF0470]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | * Gene: [[EF0471]] | ||
| + | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240] | ||
| + | ** '''82''' reactions found over '''244''' reactions in the full pathway | ||
| + | * [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480] | ||
| + | ** '''10''' reactions found over '''39''' reactions in the full pathway | ||
| + | * [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230] | ||
| + | ** '''97''' reactions found over '''298''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-l_plantarum_wcfs1]] | ** Source: [[orthology-l_plantarum_wcfs1]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | + | * BioCyc : META:ADPREDUCT-RXN | |
| − | + | * MetaNetX (MNX) Equation : MNXR104060 | |
| − | * BioCyc : META: | + | * KEGG Reaction : R02017 |
| − | * MetaNetX (MNX) Equation : | + | * EC Number : 1.17.4.1 |
| − | * KEGG Reaction : | + | |
| − | * EC Number : 1. | + | |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Ribonucleoside-diphosphate reductase (ADP)}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF0472|EF0470|EF0471}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=map01100|map00240|map00480|map00230}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| − | {{#set: reconstruction source=orthology-l_plantarum_wcfs1}} | + | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}} |
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:27, 21 March 2018
Contents
Reaction RNDR1
- direction:
- LEFT-TO-RIGHT
- common name:
- Ribonucleoside-diphosphate reductase (ADP)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 ADP C10H12N5O10P2[c] + 1.0 Reduced thioredoxin[c] => 1.0 H2O H2O[c] + 1.0 Oxidized thioredoxin[c] + 1.0 DADP C10H12N5O9P2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
- map00240: map00240
- 82 reactions found over 244 reactions in the full pathway
- map00480: map00480
- 10 reactions found over 39 reactions in the full pathway
- map00230: map00230
- 97 reactions found over 298 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-l_plantarum_wcfs1
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
External links
- BioCyc : META:ADPREDUCT-RXN
- MetaNetX (MNX) Equation : MNXR104060
- KEGG Reaction : R02017
- EC Number : 1.17.4.1
